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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_D10
         (662 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)              78   7e-15
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)                   75   7e-14
SB_4971| Best HMM Match : Ras (HMM E-Value=0)                          66   3e-11
SB_28695| Best HMM Match : Ras (HMM E-Value=0)                         60   2e-09
SB_13045| Best HMM Match : Ras (HMM E-Value=0)                         58   6e-09
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)               57   1e-08
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)              57   1e-08
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)              57   1e-08
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)                   56   3e-08
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)              55   4e-08
SB_36483| Best HMM Match : Ras (HMM E-Value=0)                         54   1e-07
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)                   54   1e-07
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)               54   1e-07
SB_27557| Best HMM Match : Ras (HMM E-Value=0)                         52   3e-07
SB_7589| Best HMM Match : Ras (HMM E-Value=0)                          52   6e-07
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)              48   7e-06
SB_8315| Best HMM Match : Ras (HMM E-Value=0)                          48   9e-06
SB_50855| Best HMM Match : Ras (HMM E-Value=0)                         47   2e-05
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)                46   3e-05
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)                      45   6e-05
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)                   44   8e-05
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)              44   1e-04
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)              43   2e-04
SB_54971| Best HMM Match : Ras (HMM E-Value=0)                         42   6e-04
SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05)                   42   6e-04
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)              40   0.002
SB_44625| Best HMM Match : Ras (HMM E-Value=0)                         39   0.004
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)                   38   0.006
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)                   37   0.017
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)                     36   0.022
SB_47462| Best HMM Match : Ras (HMM E-Value=0)                         36   0.029
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)                   36   0.039
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)                      36   0.039
SB_1947| Best HMM Match : No HMM Matches (HMM E-Value=.)               35   0.051
SB_53183| Best HMM Match : Ras (HMM E-Value=0)                         34   0.12 
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)                   34   0.12 
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)               32   0.36 
SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.63 
SB_11757| Best HMM Match : Ras (HMM E-Value=0)                         31   0.84 
SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.1  
SB_92| Best HMM Match : No HMM Matches (HMM E-Value=.)                 31   1.1  
SB_23046| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.9  
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.4  
SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14)            29   3.4  
SB_43008| Best HMM Match : DUF1023 (HMM E-Value=1.7)                   29   3.4  
SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13)                 29   3.4  
SB_6223| Best HMM Match : Ras (HMM E-Value=0)                          29   4.5  
SB_1071| Best HMM Match : Ras (HMM E-Value=0)                          29   4.5  
SB_4257| Best HMM Match : Collagen (HMM E-Value=0.00073)               28   5.9  
SB_28305| Best HMM Match : MMR_HSR1 (HMM E-Value=0.0054)               28   7.8  
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)                   28   7.8  
SB_32548| Best HMM Match : Myosin_head (HMM E-Value=2.9e-17)           28   7.8  

>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 216

 Score = 77.8 bits (183), Expect = 7e-15
 Identities = 39/79 (49%), Positives = 52/79 (65%)
 Frame = +1

Query: 412 YKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDIAGL 591
           +K+LV+G++ TGK S +KRYV+  +   Y+ TIGVDFALK + W  NT IRLQ+W IAG 
Sbjct: 19  FKVLVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRLQIWLIAG- 77

Query: 592 PPSMRWRSGKRPGHKGPAA 648
               R+ S  R  +KG  A
Sbjct: 78  --QERFSSMTRVYYKGADA 94


>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
          Length = 857

 Score = 74.5 bits (175), Expect = 7e-14
 Identities = 31/43 (72%), Positives = 39/43 (90%)
 Frame = +1

Query: 382 TASSERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATI 510
           + + ERRE+L+K+LVIG+LG GKTS+IKRYVHQFFS HYRAT+
Sbjct: 662 STAGERREYLFKVLVIGDLGVGKTSLIKRYVHQFFSVHYRATV 704


>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
          Length = 209

 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 29/62 (46%), Positives = 44/62 (70%)
 Frame = +1

Query: 403 EHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDI 582
           ++L+K+L+IG+ G GK+S++ R+    FS  Y +TIGVDF ++ L  D  T I+LQ+WD 
Sbjct: 6   DYLFKLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKT-IKLQIWDT 64

Query: 583 AG 588
           AG
Sbjct: 65  AG 66


>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
          Length = 1058

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 26/62 (41%), Positives = 40/62 (64%)
 Frame = +1

Query: 403  EHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDI 582
            E ++K++ IG+ G GK+S + R+ H  +   + ATIGVDF +K +N +    I +QLWD 
Sbjct: 894  ERVFKVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQ-CIAIQLWDT 952

Query: 583  AG 588
            AG
Sbjct: 953  AG 954


>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
          Length = 629

 Score = 58.0 bits (134), Expect = 6e-09
 Identities = 26/70 (37%), Positives = 45/70 (64%)
 Frame = +1

Query: 379 ATASSERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTI 558
           A+   +  ++LYKI++IG+ G GK+S++ R+    F    ++TIGV+FA + +  +   I
Sbjct: 2   ASGRYDHYDYLYKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGK-I 60

Query: 559 IRLQLWDIAG 588
           I+ Q+WD AG
Sbjct: 61  IKAQVWDTAG 70


>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 365

 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 24/59 (40%), Positives = 40/59 (67%)
 Frame = +1

Query: 412 YKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDIAG 588
           +KI+ +G+ G GK+S+  R+++  F + Y+ TIG+DF  K +  D +  +RLQ+WD AG
Sbjct: 164 HKIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLD-DFEVRLQIWDTAG 221


>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 156

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 22/61 (36%), Positives = 41/61 (67%)
 Frame = +1

Query: 406 HLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDIA 585
           +L+KI+++G+   GKT +++++   +F  +   TIGVDF +K ++ D    ++LQ+WD A
Sbjct: 6   YLFKIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEK-VKLQIWDTA 64

Query: 586 G 588
           G
Sbjct: 65  G 65


>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 271

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 24/62 (38%), Positives = 42/62 (67%)
 Frame = +1

Query: 403 EHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDI 582
           ++ +K+LV+G+ G GKTS+I+R+   +F  +  +T+GVD   +VL+   +  ++LQ WD 
Sbjct: 9   KYSFKVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDR-VKLQCWDT 67

Query: 583 AG 588
           AG
Sbjct: 68  AG 69


>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
          Length = 115

 Score = 56.0 bits (129), Expect = 3e-08
 Identities = 23/68 (33%), Positives = 44/68 (64%)
 Frame = +1

Query: 385 ASSERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIR 564
           A+ +  ++++K+L+IG    GKTS + RY    F+  + +T+G+DF +K + +  +  ++
Sbjct: 13  AADQNFDYMFKLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRNDKRVK 71

Query: 565 LQLWDIAG 588
           LQ+WD AG
Sbjct: 72  LQIWDTAG 79


>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 919

 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 26/58 (44%), Positives = 36/58 (62%)
 Frame = +1

Query: 415 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDIAG 588
           KIL++GE G GK+S++ R+    F     ATIGVDF +K L  + N   +L +WD AG
Sbjct: 10  KILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNK-AKLAIWDTAG 66


>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
          Length = 213

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 24/62 (38%), Positives = 40/62 (64%)
 Frame = +1

Query: 403 EHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDI 582
           ++++K+LV+G+   GK+S+I+R+    F+     TIGVDF +   + D    ++LQLWD 
Sbjct: 8   DYVFKVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKK-VKLQLWDT 66

Query: 583 AG 588
           AG
Sbjct: 67  AG 68


>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
          Length = 68

 Score = 53.6 bits (123), Expect = 1e-07
 Identities = 21/59 (35%), Positives = 41/59 (69%)
 Frame = +1

Query: 403 EHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWD 579
           ++L+K+++IG+ G GK++++ R+    F+   ++TIGV+FA + +  D  T I+ Q+WD
Sbjct: 9   DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66


>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 76

 Score = 53.6 bits (123), Expect = 1e-07
 Identities = 25/72 (34%), Positives = 44/72 (61%)
 Frame = +1

Query: 370 GSHATASSERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDA 549
           GS  +   +  ++L+KI++IG+ G GK++++ RY    F    +ATIGV+ A + +  + 
Sbjct: 5   GSTTSNPEDNYDYLFKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEG 64

Query: 550 NTIIRLQLWDIA 585
            T +R Q+WD A
Sbjct: 65  KT-VRAQIWDTA 75


>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
          Length = 184

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 21/59 (35%), Positives = 40/59 (67%)
 Frame = +1

Query: 412 YKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDIAG 588
           ++I++IG+   GK+S+++++    F ++   T+GVDF ++VL    +  I+LQ+WD AG
Sbjct: 14  FRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIWDTAG 72


>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
          Length = 640

 Score = 51.6 bits (118), Expect = 6e-07
 Identities = 26/62 (41%), Positives = 35/62 (56%)
 Frame = +1

Query: 403 EHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDI 582
           E ++KI++ G+   GK+S I R     F     +T+GVDF +K L  D  T   LQLWD 
Sbjct: 440 ERMFKIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKT-YALQLWDT 498

Query: 583 AG 588
           AG
Sbjct: 499 AG 500


>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 265

 Score = 48.0 bits (109), Expect = 7e-06
 Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
 Frame = +1

Query: 331 EQNMSPKQKPNSSGS--HATASSERREHL---YKILVIGELGTGKTSIIKRYVHQFFSQH 495
           EQ+  P Q  +S  S       +E  E L   +KI++IG+   GKT +  R     F + 
Sbjct: 15  EQSEEPPQTEDSQESPDDYAVDTEEFEVLAKTFKIIIIGDSNVGKTCLAYRLCTGKFPER 74

Query: 496 YRATIGVDFALKVLNWDANTIIRLQLWDIAG 588
              TIGVDF  K L  +    ++LQLWD AG
Sbjct: 75  TETTIGVDFWEKSLELNGE-FVKLQLWDTAG 104


>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
          Length = 565

 Score = 47.6 bits (108), Expect = 9e-06
 Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 10/73 (13%)
 Frame = +1

Query: 400 REHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALK-----VLNWDANTI-- 558
           +E L K L +G+ G GKTS++ +Y    F+  +  TIG+DF  K      LN D      
Sbjct: 103 KEFLIKFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTR 162

Query: 559 ---IRLQLWDIAG 588
              I LQLWD AG
Sbjct: 163 GQRIHLQLWDTAG 175


>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
          Length = 733

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 19/59 (32%), Positives = 38/59 (64%)
 Frame = +1

Query: 412 YKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDIAG 588
           +K++++GE   GK+S++ R+V   F ++  +TIG  F  + +  D +T ++ ++WD AG
Sbjct: 22  FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLD-DTTVKFEIWDTAG 79


>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
          Length = 212

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 23/64 (35%), Positives = 35/64 (54%)
 Frame = +1

Query: 400 REHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWD 579
           R  L+K++++GE G GKTS+  R     F+   R TIG+D   K +       + L +WD
Sbjct: 8   RGPLFKVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQ-VTLSVWD 66

Query: 580 IAGL 591
            AG+
Sbjct: 67  TAGV 70


>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
          Length = 166

 Score = 44.8 bits (101), Expect = 6e-05
 Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
 Frame = +1

Query: 394 ERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQL 573
           E+R  L++I V G  G GKTSI+KR+    FS+ Y  T+  D   KVLN + + ++ L  
Sbjct: 3   EKRNSLHEIAVFGGAGVGKTSIVKRFYCGKFSEEYEPTV-EDCYSKVLNKNGSIMV-LNT 60

Query: 574 WDIAGLP--PSMRWRSGKR 624
            D +G    P+MR  + KR
Sbjct: 61  TDSSGSYQFPAMREVAIKR 79


>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
          Length = 351

 Score = 44.4 bits (100), Expect = 8e-05
 Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
 Frame = +1

Query: 409 LYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKV-LNWDANTIIRLQLWDIA 585
           +++++V+G  G GKTS++KR++   FS+ Y  T+G  +   V L+ D N    L++ D A
Sbjct: 107 VFRVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVGDLYEKSVTLSKDFNAF--LEIMDTA 164

Query: 586 GLPP 597
           G  P
Sbjct: 165 GSYP 168


>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 778

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 21/83 (25%)
 Frame = +1

Query: 403 EHLYKILVIGELGTGKTSIIKR--------------YVHQFFSQH-------YRATIGVD 519
           ++L+K+L+IG+ G GK+ ++ R              Y H   SQ        Y +TIGVD
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYISTIGVD 65

Query: 520 FALKVLNWDANTIIRLQLWDIAG 588
           F ++ +  D  T I+LQ+WD AG
Sbjct: 66  FKIRTIELDGKT-IKLQIWDTAG 87


>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 57

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 18/41 (43%), Positives = 27/41 (65%)
 Frame = +1

Query: 391 SERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIG 513
           S   E L+K+L++G+   GKTS ++RYVH    + Y+ TIG
Sbjct: 16  STMSEILFKVLIVGDATVGKTSFVQRYVHGNTRREYKPTIG 56


>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
          Length = 239

 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 20/56 (35%), Positives = 35/56 (62%)
 Frame = +1

Query: 421 LVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDIAG 588
           L +G+ GTGKT+ +KR++   F + Y AT+GV+    ++ + +   I+  +WD AG
Sbjct: 36  LQVGDGGTGKTTFVKRHLTGEFEKKYIATLGVE-VHPLIFFTSRGPIKFNVWDTAG 90


>SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05)
          Length = 243

 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
 Frame = +1

Query: 376 HATASSERREHLYKILVIGEL-GTGKTS-IIKRYVHQF-FSQHYRATIGVDFALKVLNW- 543
           ++   S   +H +KI+ +G+  G GK    +  Y+H    S + + TIGVDF +  + W 
Sbjct: 39  YSKLKSRASDHTFKIMCVGDYTGFGKKGGFLSDYIHNRPLSFYQKPTIGVDFYVHFIEWR 98

Query: 544 ----DANTIIRLQLWDIA 585
                 ++ ++LQ WD+A
Sbjct: 99  ETDKKKDSTVKLQFWDVA 116


>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 410

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 24/67 (35%), Positives = 37/67 (55%)
 Frame = +1

Query: 439 GTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDIAGLPPSMRWRSG 618
           G GK+S++ R+V   F      TIGV+F  K +  D  +   LQ+WD AG     R++S 
Sbjct: 221 GVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGES-YTLQIWDTAG---QERFKSL 276

Query: 619 KRPGHKG 639
           + P ++G
Sbjct: 277 RTPFYRG 283


>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
          Length = 128

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 17/35 (48%), Positives = 23/35 (65%)
 Frame = +1

Query: 484 FSQHYRATIGVDFALKVLNWDANTIIRLQLWDIAG 588
           FS  Y  TIGVDF ++ +N D    ++LQ+WD AG
Sbjct: 2   FSGSYITTIGVDFKIRTINIDGEK-VKLQIWDTAG 35


>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
          Length = 159

 Score = 38.3 bits (85), Expect = 0.006
 Identities = 19/63 (30%), Positives = 32/63 (50%)
 Frame = +1

Query: 403 EHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDI 582
           + +YKI + G++G GKTSI  R     F +  ++   +D     L    N  +++ LWD 
Sbjct: 6   DEVYKIALCGKMGVGKTSIYTRLSTDEFPEEEQSLHHIDQCFIPLVCICNKKLKIHLWDT 65

Query: 583 AGL 591
            G+
Sbjct: 66  LGM 68


>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
          Length = 965

 Score = 36.7 bits (81), Expect = 0.017
 Identities = 22/91 (24%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
 Frame = +1

Query: 322  YVNEQNMSPKQKPNSSG--SHATASSERREHLYKILVIGELGTGKTSIIKRYVHQFFSQH 495
            Y   +N++ K+K N++    + + +S  +  + K+++IGE G GK+++  R++ + F   
Sbjct: 830  YPQPKNIAMKRKDNNNTLKKNRSKASSHQGRIVKVVIIGEDGVGKSALTVRFLTKRFIGE 889

Query: 496  YRATIGVDFALKVLNWDANTIIRLQLWDIAG 588
            Y  T+   +        A  ++ ++L D AG
Sbjct: 890  YDDTLESTYRQDA--EVAGEVVAIELTDTAG 918


>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
          Length = 263

 Score = 36.3 bits (80), Expect = 0.022
 Identities = 20/61 (32%), Positives = 36/61 (59%)
 Frame = +1

Query: 403 EHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDI 582
           +H+Y+I ++G+ G GKT+++ R++   F   Y  TI  D   K +N D +  + L++ D 
Sbjct: 3   DHVYRIALLGDEGVGKTALLVRFLCHRFLGEYDPTI-EDKYRKSINID-DVTVTLEILDT 60

Query: 583 A 585
           A
Sbjct: 61  A 61


>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
          Length = 385

 Score = 35.9 bits (79), Expect = 0.029
 Identities = 22/59 (37%), Positives = 34/59 (57%)
 Frame = +1

Query: 412 YKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDIAG 588
           YK++V+G  G GK+++  ++V   F + Y  TI  DF  K +  D N  I L++ D AG
Sbjct: 4   YKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTI-EDFYRKEIEVDNNPSI-LEILDTAG 60


>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
          Length = 506

 Score = 35.5 bits (78), Expect = 0.039
 Identities = 18/57 (31%), Positives = 31/57 (54%)
 Frame = +1

Query: 418 ILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDIAG 588
           ++++G+   GKT+++  YV   F++ Y AT+    +  V   D    I L LWD +G
Sbjct: 235 VILVGDSECGKTALLNAYVRNQFNEKYEATVFNSLSTAV-EVDGER-IELTLWDTSG 289


>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
          Length = 368

 Score = 35.5 bits (78), Expect = 0.039
 Identities = 18/59 (30%), Positives = 32/59 (54%)
 Frame = +1

Query: 337 NMSPKQKPNSSGSHATASSERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIG 513
           +++PK K    G++   S +     Y ++V+G  G GKT+++ R+V   F   Y  T+G
Sbjct: 305 SLAPKPKDPKDGNNNKPSEK-----YSMVVLGAAGVGKTALVVRFVTGRFLNEYDPTLG 358


>SB_1947| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 309

 Score = 35.1 bits (77), Expect = 0.051
 Identities = 17/79 (21%), Positives = 38/79 (48%)
 Frame = +1

Query: 298 LYILTFLTYVNEQNMSPKQKPNSSGSHATASSERREHLYKILVIGELGTGKTSIIKRYVH 477
           +Y    L    + + SP +KP +S      +S R+    +IL+ G+ G GK++++    +
Sbjct: 126 IYTNLELITTKQHSSSPSRKPLNSYEELFVTSSRQNKTKRILIEGKAGVGKSTLVSEMAY 185

Query: 478 QFFSQHYRATIGVDFALKV 534
            + +    A   + F +++
Sbjct: 186 DWATNENLAQFSMVFFIEL 204


>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
          Length = 834

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 14/36 (38%), Positives = 25/36 (69%)
 Frame = +1

Query: 403 EHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATI 510
           ++L+K+L+IG+ G GKT I+ R+    F+  + +TI
Sbjct: 7   DYLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTI 42


>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
          Length = 270

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = +1

Query: 412 YKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWD 546
           YKI ++G  G GKTS++K +    FS+ +  T+  D+ +  +N D
Sbjct: 13  YKISILGAGGVGKTSLLKTFFGHKFSEKHVPTVD-DYFIHSVNMD 56


>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 244

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
 Frame = +1

Query: 415 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNW----DANTIIRLQLWDI 582
           +I V+G+ G GKTS++    H+        TIG    +K+ ++           L+ WDI
Sbjct: 8   RIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEGMPGGKTFFLEFWDI 67

Query: 583 AG 588
            G
Sbjct: 68  GG 69


>SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 117

 Score = 31.5 bits (68), Expect = 0.63
 Identities = 24/74 (32%), Positives = 35/74 (47%)
 Frame = +1

Query: 358 PNSSGSHATASSERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVL 537
           P  S +HAT  SER    YK+ V+G+  +GKTS++   V           I  +    V 
Sbjct: 50  PEQSDTHAT--SER----YKLSVVGDAESGKTSLLNALVKSDIEVE-ETVIFEECVTDVT 102

Query: 538 NWDANTIIRLQLWD 579
           + D+N  +   LWD
Sbjct: 103 SGDSN--LEFMLWD 114


>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
          Length = 211

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +1

Query: 394 ERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRAT 507
           ER++   K +++G+ G GKTS++  Y+   F   Y  T
Sbjct: 13  ERKKEQLKCVIVGDGGVGKTSLLVSYMMDGFPNSYVPT 50


>SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 60

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 10/27 (37%), Positives = 22/27 (81%)
 Frame = +1

Query: 415 KILVIGELGTGKTSIIKRYVHQFFSQH 495
           K++++G+  +GKTS+++RY+H  F+ +
Sbjct: 29  KVVLLGKEYSGKTSLVERYLHHRFNDN 55


>SB_92| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 247

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +1

Query: 463 KRYVHQFFSQHYRA-TIGVDFALKVLNWDANTIIRLQ 570
           K + H F S H R  T GV+F L++L +D     RLQ
Sbjct: 176 KTFQHVFGSDHNRPDTAGVEFRLRLLGFDTQVTRRLQ 212


>SB_23046| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2708

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +1

Query: 394  ERREHLYKILVIGELG 441
            E +EHLYK+LVIGE G
Sbjct: 2536 EVKEHLYKVLVIGEYG 2551


>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1306

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
 Frame = +1

Query: 340 MSPKQKPNS-SGSHATASSERREHLYK--ILVIGELGTGKTSIIKRYVHQFFSQHYRATI 510
           M  +QK +    SH         +L K  I V+GE   GK+S+I+ +  + F + Y  TI
Sbjct: 1   MKKQQKSSKRKASHQALGKRSSAYLKKLTIAVLGEGRVGKSSLIRGFCGEGFQEEYVPTI 60


>SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14)
          Length = 1197

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 8/21 (38%), Positives = 18/21 (85%)
 Frame = +1

Query: 418 ILVIGELGTGKTSIIKRYVHQ 480
           ++++GE G+GKT+ + +Y+H+
Sbjct: 628 VIIVGETGSGKTTQLTQYMHE 648


>SB_43008| Best HMM Match : DUF1023 (HMM E-Value=1.7)
          Length = 366

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
 Frame = -1

Query: 458 IEVFPVPSSPITSILYKCSLRSELAVACEPLEFGFCLGDMF--CSFTYVRNVKIYKNKSN 285
           +E    P   +  I  K    +EL  AC  L+    LG +F  C++TY    K+  ++  
Sbjct: 143 LESMRAPELSVYYIPSKTQKNAELLAACCDLD----LGGLFPHCAYTYTYKYKMIADRLW 198

Query: 284 MAIYEMNIEFSRICTSASHNRSLIKASRSSY 192
            A++E+     R  ++A    S ++ S  S+
Sbjct: 199 SAMHEVAAAAKRDMSTAMPTASALRDSPMSF 229


>SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13)
          Length = 1383

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 16/63 (25%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
 Frame = +1

Query: 415 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDF-----ALKVLNWDANTIIRLQLWD 579
           K+ ++G  G GKT+++K      F  +++ +  +D       L++ N D N  +R++++D
Sbjct: 569 KVTIVGGEGAGKTTLVKAL---GFKYNWKLSTVMDSEERTKGLEISNIDLNESLRMKVFD 625

Query: 580 IAG 588
           + G
Sbjct: 626 LGG 628


>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
          Length = 1665

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +1

Query: 412 YKILVIGELGTGKTSIIKRYVHQFFSQHYRATI 510
           YK++V+G  G GK+++  +++   F   Y  TI
Sbjct: 12  YKLVVVGGGGVGKSALTIQFIQSHFVSDYDPTI 44


>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
          Length = 228

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +1

Query: 412 YKILVIGELGTGKTSIIKRYVHQFFSQHYRATI 510
           YK++V+G  G GK+++  ++V   F + Y  TI
Sbjct: 4   YKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTI 36


>SB_4257| Best HMM Match : Collagen (HMM E-Value=0.00073)
          Length = 863

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
 Frame = +1

Query: 328 NEQNMSPKQKPNSSGSHATASSE----RREHLYKILVIGELGT 444
           +E + SPK+KPN++  HAT S       +  +  + VIG L T
Sbjct: 739 SELSSSPKKKPNNNHDHATKSRTYYRLSKTAVMMVAVIGVLST 781


>SB_28305| Best HMM Match : MMR_HSR1 (HMM E-Value=0.0054)
          Length = 425

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +1

Query: 355 KPNSSGSHATASSERREHLYKILVIGELGTGKTSIIK 465
           K  S  SH  +S E  + L + LV+G +G+GK+  I+
Sbjct: 100 KATSLWSHGASSKEPAKEL-RFLVLGPVGSGKSKFIE 135


>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
          Length = 2748

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = +1

Query: 403  EHLYKILVIGELGTGKTSIIKRYVHQFFSQ 492
            E ++++ V+G  G GK+S+  RY+   F++
Sbjct: 2596 ETMFRLCVVGSGGVGKSSVTIRYLKNEFTE 2625


>SB_32548| Best HMM Match : Myosin_head (HMM E-Value=2.9e-17)
          Length = 546

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +1

Query: 418 ILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNW 543
           +L+ GE G GKT   KR +    +    +T G  F   +LN+
Sbjct: 112 MLISGESGAGKTEASKRILEYLAAISTSSTEGAPFGGHILNY 153


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,051,048
Number of Sequences: 59808
Number of extensions: 379310
Number of successful extensions: 1205
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1201
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1705624125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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