BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I09A02NGRL0002_D10 (662 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 7e-15 SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 75 7e-14 SB_4971| Best HMM Match : Ras (HMM E-Value=0) 66 3e-11 SB_28695| Best HMM Match : Ras (HMM E-Value=0) 60 2e-09 SB_13045| Best HMM Match : Ras (HMM E-Value=0) 58 6e-09 SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08 SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08 SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08 SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 56 3e-08 SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 4e-08 SB_36483| Best HMM Match : Ras (HMM E-Value=0) 54 1e-07 SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 54 1e-07 SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07 SB_27557| Best HMM Match : Ras (HMM E-Value=0) 52 3e-07 SB_7589| Best HMM Match : Ras (HMM E-Value=0) 52 6e-07 SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06 SB_8315| Best HMM Match : Ras (HMM E-Value=0) 48 9e-06 SB_50855| Best HMM Match : Ras (HMM E-Value=0) 47 2e-05 SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 46 3e-05 SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 45 6e-05 SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 44 8e-05 SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04 SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04 SB_54971| Best HMM Match : Ras (HMM E-Value=0) 42 6e-04 SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05) 42 6e-04 SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002 SB_44625| Best HMM Match : Ras (HMM E-Value=0) 39 0.004 SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 38 0.006 SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 37 0.017 SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 36 0.022 SB_47462| Best HMM Match : Ras (HMM E-Value=0) 36 0.029 SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 36 0.039 SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 36 0.039 SB_1947| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.051 SB_53183| Best HMM Match : Ras (HMM E-Value=0) 34 0.12 SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 34 0.12 SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.36 SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.63 SB_11757| Best HMM Match : Ras (HMM E-Value=0) 31 0.84 SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1 SB_92| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1 SB_23046| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9 SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4 SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14) 29 3.4 SB_43008| Best HMM Match : DUF1023 (HMM E-Value=1.7) 29 3.4 SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13) 29 3.4 SB_6223| Best HMM Match : Ras (HMM E-Value=0) 29 4.5 SB_1071| Best HMM Match : Ras (HMM E-Value=0) 29 4.5 SB_4257| Best HMM Match : Collagen (HMM E-Value=0.00073) 28 5.9 SB_28305| Best HMM Match : MMR_HSR1 (HMM E-Value=0.0054) 28 7.8 SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 28 7.8 SB_32548| Best HMM Match : Myosin_head (HMM E-Value=2.9e-17) 28 7.8 >SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 216 Score = 77.8 bits (183), Expect = 7e-15 Identities = 39/79 (49%), Positives = 52/79 (65%) Frame = +1 Query: 412 YKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDIAGL 591 +K+LV+G++ TGK S +KRYV+ + Y+ TIGVDFALK + W NT IRLQ+W IAG Sbjct: 19 FKVLVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRLQIWLIAG- 77 Query: 592 PPSMRWRSGKRPGHKGPAA 648 R+ S R +KG A Sbjct: 78 --QERFSSMTRVYYKGADA 94 >SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) Length = 857 Score = 74.5 bits (175), Expect = 7e-14 Identities = 31/43 (72%), Positives = 39/43 (90%) Frame = +1 Query: 382 TASSERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATI 510 + + ERRE+L+K+LVIG+LG GKTS+IKRYVHQFFS HYRAT+ Sbjct: 662 STAGERREYLFKVLVIGDLGVGKTSLIKRYVHQFFSVHYRATV 704 >SB_4971| Best HMM Match : Ras (HMM E-Value=0) Length = 209 Score = 65.7 bits (153), Expect = 3e-11 Identities = 29/62 (46%), Positives = 44/62 (70%) Frame = +1 Query: 403 EHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDI 582 ++L+K+L+IG+ G GK+S++ R+ FS Y +TIGVDF ++ L D T I+LQ+WD Sbjct: 6 DYLFKLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKT-IKLQIWDT 64 Query: 583 AG 588 AG Sbjct: 65 AG 66 >SB_28695| Best HMM Match : Ras (HMM E-Value=0) Length = 1058 Score = 59.7 bits (138), Expect = 2e-09 Identities = 26/62 (41%), Positives = 40/62 (64%) Frame = +1 Query: 403 EHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDI 582 E ++K++ IG+ G GK+S + R+ H + + ATIGVDF +K +N + I +QLWD Sbjct: 894 ERVFKVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQ-CIAIQLWDT 952 Query: 583 AG 588 AG Sbjct: 953 AG 954 >SB_13045| Best HMM Match : Ras (HMM E-Value=0) Length = 629 Score = 58.0 bits (134), Expect = 6e-09 Identities = 26/70 (37%), Positives = 45/70 (64%) Frame = +1 Query: 379 ATASSERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTI 558 A+ + ++LYKI++IG+ G GK+S++ R+ F ++TIGV+FA + + + I Sbjct: 2 ASGRYDHYDYLYKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGK-I 60 Query: 559 IRLQLWDIAG 588 I+ Q+WD AG Sbjct: 61 IKAQVWDTAG 70 >SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 365 Score = 57.2 bits (132), Expect = 1e-08 Identities = 24/59 (40%), Positives = 40/59 (67%) Frame = +1 Query: 412 YKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDIAG 588 +KI+ +G+ G GK+S+ R+++ F + Y+ TIG+DF K + D + +RLQ+WD AG Sbjct: 164 HKIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLD-DFEVRLQIWDTAG 221 >SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 156 Score = 56.8 bits (131), Expect = 1e-08 Identities = 22/61 (36%), Positives = 41/61 (67%) Frame = +1 Query: 406 HLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDIA 585 +L+KI+++G+ GKT +++++ +F + TIGVDF +K ++ D ++LQ+WD A Sbjct: 6 YLFKIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEK-VKLQIWDTA 64 Query: 586 G 588 G Sbjct: 65 G 65 >SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 271 Score = 56.8 bits (131), Expect = 1e-08 Identities = 24/62 (38%), Positives = 42/62 (67%) Frame = +1 Query: 403 EHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDI 582 ++ +K+LV+G+ G GKTS+I+R+ +F + +T+GVD +VL+ + ++LQ WD Sbjct: 9 KYSFKVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDR-VKLQCWDT 67 Query: 583 AG 588 AG Sbjct: 68 AG 69 >SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) Length = 115 Score = 56.0 bits (129), Expect = 3e-08 Identities = 23/68 (33%), Positives = 44/68 (64%) Frame = +1 Query: 385 ASSERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIR 564 A+ + ++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + + ++ Sbjct: 13 AADQNFDYMFKLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRNDKRVK 71 Query: 565 LQLWDIAG 588 LQ+WD AG Sbjct: 72 LQIWDTAG 79 >SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 919 Score = 55.2 bits (127), Expect = 4e-08 Identities = 26/58 (44%), Positives = 36/58 (62%) Frame = +1 Query: 415 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDIAG 588 KIL++GE G GK+S++ R+ F ATIGVDF +K L + N +L +WD AG Sbjct: 10 KILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNK-AKLAIWDTAG 66 >SB_36483| Best HMM Match : Ras (HMM E-Value=0) Length = 213 Score = 54.0 bits (124), Expect = 1e-07 Identities = 24/62 (38%), Positives = 40/62 (64%) Frame = +1 Query: 403 EHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDI 582 ++++K+LV+G+ GK+S+I+R+ F+ TIGVDF + + D ++LQLWD Sbjct: 8 DYVFKVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKK-VKLQLWDT 66 Query: 583 AG 588 AG Sbjct: 67 AG 68 >SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) Length = 68 Score = 53.6 bits (123), Expect = 1e-07 Identities = 21/59 (35%), Positives = 41/59 (69%) Frame = +1 Query: 403 EHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWD 579 ++L+K+++IG+ G GK++++ R+ F+ ++TIGV+FA + + D T I+ Q+WD Sbjct: 9 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 >SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 76 Score = 53.6 bits (123), Expect = 1e-07 Identities = 25/72 (34%), Positives = 44/72 (61%) Frame = +1 Query: 370 GSHATASSERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDA 549 GS + + ++L+KI++IG+ G GK++++ RY F +ATIGV+ A + + + Sbjct: 5 GSTTSNPEDNYDYLFKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEG 64 Query: 550 NTIIRLQLWDIA 585 T +R Q+WD A Sbjct: 65 KT-VRAQIWDTA 75 >SB_27557| Best HMM Match : Ras (HMM E-Value=0) Length = 184 Score = 52.4 bits (120), Expect = 3e-07 Identities = 21/59 (35%), Positives = 40/59 (67%) Frame = +1 Query: 412 YKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDIAG 588 ++I++IG+ GK+S+++++ F ++ T+GVDF ++VL + I+LQ+WD AG Sbjct: 14 FRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIWDTAG 72 >SB_7589| Best HMM Match : Ras (HMM E-Value=0) Length = 640 Score = 51.6 bits (118), Expect = 6e-07 Identities = 26/62 (41%), Positives = 35/62 (56%) Frame = +1 Query: 403 EHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDI 582 E ++KI++ G+ GK+S I R F +T+GVDF +K L D T LQLWD Sbjct: 440 ERMFKIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKT-YALQLWDT 498 Query: 583 AG 588 AG Sbjct: 499 AG 500 >SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 265 Score = 48.0 bits (109), Expect = 7e-06 Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 5/91 (5%) Frame = +1 Query: 331 EQNMSPKQKPNSSGS--HATASSERREHL---YKILVIGELGTGKTSIIKRYVHQFFSQH 495 EQ+ P Q +S S +E E L +KI++IG+ GKT + R F + Sbjct: 15 EQSEEPPQTEDSQESPDDYAVDTEEFEVLAKTFKIIIIGDSNVGKTCLAYRLCTGKFPER 74 Query: 496 YRATIGVDFALKVLNWDANTIIRLQLWDIAG 588 TIGVDF K L + ++LQLWD AG Sbjct: 75 TETTIGVDFWEKSLELNGE-FVKLQLWDTAG 104 >SB_8315| Best HMM Match : Ras (HMM E-Value=0) Length = 565 Score = 47.6 bits (108), Expect = 9e-06 Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 10/73 (13%) Frame = +1 Query: 400 REHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALK-----VLNWDANTI-- 558 +E L K L +G+ G GKTS++ +Y F+ + TIG+DF K LN D Sbjct: 103 KEFLIKFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTR 162 Query: 559 ---IRLQLWDIAG 588 I LQLWD AG Sbjct: 163 GQRIHLQLWDTAG 175 >SB_50855| Best HMM Match : Ras (HMM E-Value=0) Length = 733 Score = 46.8 bits (106), Expect = 2e-05 Identities = 19/59 (32%), Positives = 38/59 (64%) Frame = +1 Query: 412 YKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDIAG 588 +K++++GE GK+S++ R+V F ++ +TIG F + + D +T ++ ++WD AG Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLD-DTTVKFEIWDTAG 79 >SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) Length = 212 Score = 46.0 bits (104), Expect = 3e-05 Identities = 23/64 (35%), Positives = 35/64 (54%) Frame = +1 Query: 400 REHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWD 579 R L+K++++GE G GKTS+ R F+ R TIG+D K + + L +WD Sbjct: 8 RGPLFKVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQ-VTLSVWD 66 Query: 580 IAGL 591 AG+ Sbjct: 67 TAGV 70 >SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) Length = 166 Score = 44.8 bits (101), Expect = 6e-05 Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 2/79 (2%) Frame = +1 Query: 394 ERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQL 573 E+R L++I V G G GKTSI+KR+ FS+ Y T+ D KVLN + + ++ L Sbjct: 3 EKRNSLHEIAVFGGAGVGKTSIVKRFYCGKFSEEYEPTV-EDCYSKVLNKNGSIMV-LNT 60 Query: 574 WDIAGLP--PSMRWRSGKR 624 D +G P+MR + KR Sbjct: 61 TDSSGSYQFPAMREVAIKR 79 >SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) Length = 351 Score = 44.4 bits (100), Expect = 8e-05 Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 1/64 (1%) Frame = +1 Query: 409 LYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKV-LNWDANTIIRLQLWDIA 585 +++++V+G G GKTS++KR++ FS+ Y T+G + V L+ D N L++ D A Sbjct: 107 VFRVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVGDLYEKSVTLSKDFNAF--LEIMDTA 164 Query: 586 GLPP 597 G P Sbjct: 165 GSYP 168 >SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 778 Score = 43.6 bits (98), Expect = 1e-04 Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 21/83 (25%) Frame = +1 Query: 403 EHLYKILVIGELGTGKTSIIKR--------------YVHQFFSQH-------YRATIGVD 519 ++L+K+L+IG+ G GK+ ++ R Y H SQ Y +TIGVD Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYISTIGVD 65 Query: 520 FALKVLNWDANTIIRLQLWDIAG 588 F ++ + D T I+LQ+WD AG Sbjct: 66 FKIRTIELDGKT-IKLQIWDTAG 87 >SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 57 Score = 43.2 bits (97), Expect = 2e-04 Identities = 18/41 (43%), Positives = 27/41 (65%) Frame = +1 Query: 391 SERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIG 513 S E L+K+L++G+ GKTS ++RYVH + Y+ TIG Sbjct: 16 STMSEILFKVLIVGDATVGKTSFVQRYVHGNTRREYKPTIG 56 >SB_54971| Best HMM Match : Ras (HMM E-Value=0) Length = 239 Score = 41.5 bits (93), Expect = 6e-04 Identities = 20/56 (35%), Positives = 35/56 (62%) Frame = +1 Query: 421 LVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDIAG 588 L +G+ GTGKT+ +KR++ F + Y AT+GV+ ++ + + I+ +WD AG Sbjct: 36 LQVGDGGTGKTTFVKRHLTGEFEKKYIATLGVE-VHPLIFFTSRGPIKFNVWDTAG 90 >SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05) Length = 243 Score = 41.5 bits (93), Expect = 6e-04 Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 8/78 (10%) Frame = +1 Query: 376 HATASSERREHLYKILVIGEL-GTGKTS-IIKRYVHQF-FSQHYRATIGVDFALKVLNW- 543 ++ S +H +KI+ +G+ G GK + Y+H S + + TIGVDF + + W Sbjct: 39 YSKLKSRASDHTFKIMCVGDYTGFGKKGGFLSDYIHNRPLSFYQKPTIGVDFYVHFIEWR 98 Query: 544 ----DANTIIRLQLWDIA 585 ++ ++LQ WD+A Sbjct: 99 ETDKKKDSTVKLQFWDVA 116 >SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 410 Score = 39.5 bits (88), Expect = 0.002 Identities = 24/67 (35%), Positives = 37/67 (55%) Frame = +1 Query: 439 GTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDIAGLPPSMRWRSG 618 G GK+S++ R+V F TIGV+F K + D + LQ+WD AG R++S Sbjct: 221 GVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGES-YTLQIWDTAG---QERFKSL 276 Query: 619 KRPGHKG 639 + P ++G Sbjct: 277 RTPFYRG 283 >SB_44625| Best HMM Match : Ras (HMM E-Value=0) Length = 128 Score = 38.7 bits (86), Expect = 0.004 Identities = 17/35 (48%), Positives = 23/35 (65%) Frame = +1 Query: 484 FSQHYRATIGVDFALKVLNWDANTIIRLQLWDIAG 588 FS Y TIGVDF ++ +N D ++LQ+WD AG Sbjct: 2 FSGSYITTIGVDFKIRTINIDGEK-VKLQIWDTAG 35 >SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) Length = 159 Score = 38.3 bits (85), Expect = 0.006 Identities = 19/63 (30%), Positives = 32/63 (50%) Frame = +1 Query: 403 EHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDI 582 + +YKI + G++G GKTSI R F + ++ +D L N +++ LWD Sbjct: 6 DEVYKIALCGKMGVGKTSIYTRLSTDEFPEEEQSLHHIDQCFIPLVCICNKKLKIHLWDT 65 Query: 583 AGL 591 G+ Sbjct: 66 LGM 68 >SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) Length = 965 Score = 36.7 bits (81), Expect = 0.017 Identities = 22/91 (24%), Positives = 48/91 (52%), Gaps = 2/91 (2%) Frame = +1 Query: 322 YVNEQNMSPKQKPNSSG--SHATASSERREHLYKILVIGELGTGKTSIIKRYVHQFFSQH 495 Y +N++ K+K N++ + + +S + + K+++IGE G GK+++ R++ + F Sbjct: 830 YPQPKNIAMKRKDNNNTLKKNRSKASSHQGRIVKVVIIGEDGVGKSALTVRFLTKRFIGE 889 Query: 496 YRATIGVDFALKVLNWDANTIIRLQLWDIAG 588 Y T+ + A ++ ++L D AG Sbjct: 890 YDDTLESTYRQDA--EVAGEVVAIELTDTAG 918 >SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) Length = 263 Score = 36.3 bits (80), Expect = 0.022 Identities = 20/61 (32%), Positives = 36/61 (59%) Frame = +1 Query: 403 EHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDI 582 +H+Y+I ++G+ G GKT+++ R++ F Y TI D K +N D + + L++ D Sbjct: 3 DHVYRIALLGDEGVGKTALLVRFLCHRFLGEYDPTI-EDKYRKSINID-DVTVTLEILDT 60 Query: 583 A 585 A Sbjct: 61 A 61 >SB_47462| Best HMM Match : Ras (HMM E-Value=0) Length = 385 Score = 35.9 bits (79), Expect = 0.029 Identities = 22/59 (37%), Positives = 34/59 (57%) Frame = +1 Query: 412 YKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDIAG 588 YK++V+G G GK+++ ++V F + Y TI DF K + D N I L++ D AG Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTI-EDFYRKEIEVDNNPSI-LEILDTAG 60 >SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) Length = 506 Score = 35.5 bits (78), Expect = 0.039 Identities = 18/57 (31%), Positives = 31/57 (54%) Frame = +1 Query: 418 ILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDIAG 588 ++++G+ GKT+++ YV F++ Y AT+ + V D I L LWD +G Sbjct: 235 VILVGDSECGKTALLNAYVRNQFNEKYEATVFNSLSTAV-EVDGER-IELTLWDTSG 289 >SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) Length = 368 Score = 35.5 bits (78), Expect = 0.039 Identities = 18/59 (30%), Positives = 32/59 (54%) Frame = +1 Query: 337 NMSPKQKPNSSGSHATASSERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIG 513 +++PK K G++ S + Y ++V+G G GKT+++ R+V F Y T+G Sbjct: 305 SLAPKPKDPKDGNNNKPSEK-----YSMVVLGAAGVGKTALVVRFVTGRFLNEYDPTLG 358 >SB_1947| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 309 Score = 35.1 bits (77), Expect = 0.051 Identities = 17/79 (21%), Positives = 38/79 (48%) Frame = +1 Query: 298 LYILTFLTYVNEQNMSPKQKPNSSGSHATASSERREHLYKILVIGELGTGKTSIIKRYVH 477 +Y L + + SP +KP +S +S R+ +IL+ G+ G GK++++ + Sbjct: 126 IYTNLELITTKQHSSSPSRKPLNSYEELFVTSSRQNKTKRILIEGKAGVGKSTLVSEMAY 185 Query: 478 QFFSQHYRATIGVDFALKV 534 + + A + F +++ Sbjct: 186 DWATNENLAQFSMVFFIEL 204 >SB_53183| Best HMM Match : Ras (HMM E-Value=0) Length = 834 Score = 33.9 bits (74), Expect = 0.12 Identities = 14/36 (38%), Positives = 25/36 (69%) Frame = +1 Query: 403 EHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATI 510 ++L+K+L+IG+ G GKT I+ R+ F+ + +TI Sbjct: 7 DYLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTI 42 >SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) Length = 270 Score = 33.9 bits (74), Expect = 0.12 Identities = 16/45 (35%), Positives = 27/45 (60%) Frame = +1 Query: 412 YKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWD 546 YKI ++G G GKTS++K + FS+ + T+ D+ + +N D Sbjct: 13 YKISILGAGGVGKTSLLKTFFGHKFSEKHVPTVD-DYFIHSVNMD 56 >SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 244 Score = 32.3 bits (70), Expect = 0.36 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Frame = +1 Query: 415 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNW----DANTIIRLQLWDI 582 +I V+G+ G GKTS++ H+ TIG +K+ ++ L+ WDI Sbjct: 8 RIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEGMPGGKTFFLEFWDI 67 Query: 583 AG 588 G Sbjct: 68 GG 69 >SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 117 Score = 31.5 bits (68), Expect = 0.63 Identities = 24/74 (32%), Positives = 35/74 (47%) Frame = +1 Query: 358 PNSSGSHATASSERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVL 537 P S +HAT SER YK+ V+G+ +GKTS++ V I + V Sbjct: 50 PEQSDTHAT--SER----YKLSVVGDAESGKTSLLNALVKSDIEVE-ETVIFEECVTDVT 102 Query: 538 NWDANTIIRLQLWD 579 + D+N + LWD Sbjct: 103 SGDSN--LEFMLWD 114 >SB_11757| Best HMM Match : Ras (HMM E-Value=0) Length = 211 Score = 31.1 bits (67), Expect = 0.84 Identities = 13/38 (34%), Positives = 22/38 (57%) Frame = +1 Query: 394 ERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRAT 507 ER++ K +++G+ G GKTS++ Y+ F Y T Sbjct: 13 ERKKEQLKCVIVGDGGVGKTSLLVSYMMDGFPNSYVPT 50 >SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 60 Score = 30.7 bits (66), Expect = 1.1 Identities = 10/27 (37%), Positives = 22/27 (81%) Frame = +1 Query: 415 KILVIGELGTGKTSIIKRYVHQFFSQH 495 K++++G+ +GKTS+++RY+H F+ + Sbjct: 29 KVVLLGKEYSGKTSLVERYLHHRFNDN 55 >SB_92| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 247 Score = 30.7 bits (66), Expect = 1.1 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = +1 Query: 463 KRYVHQFFSQHYRA-TIGVDFALKVLNWDANTIIRLQ 570 K + H F S H R T GV+F L++L +D RLQ Sbjct: 176 KTFQHVFGSDHNRPDTAGVEFRLRLLGFDTQVTRRLQ 212 >SB_23046| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2708 Score = 29.9 bits (64), Expect = 1.9 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = +1 Query: 394 ERREHLYKILVIGELG 441 E +EHLYK+LVIGE G Sbjct: 2536 EVKEHLYKVLVIGEYG 2551 >SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1306 Score = 29.1 bits (62), Expect = 3.4 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%) Frame = +1 Query: 340 MSPKQKPNS-SGSHATASSERREHLYK--ILVIGELGTGKTSIIKRYVHQFFSQHYRATI 510 M +QK + SH +L K I V+GE GK+S+I+ + + F + Y TI Sbjct: 1 MKKQQKSSKRKASHQALGKRSSAYLKKLTIAVLGEGRVGKSSLIRGFCGEGFQEEYVPTI 60 >SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14) Length = 1197 Score = 29.1 bits (62), Expect = 3.4 Identities = 8/21 (38%), Positives = 18/21 (85%) Frame = +1 Query: 418 ILVIGELGTGKTSIIKRYVHQ 480 ++++GE G+GKT+ + +Y+H+ Sbjct: 628 VIIVGETGSGKTTQLTQYMHE 648 >SB_43008| Best HMM Match : DUF1023 (HMM E-Value=1.7) Length = 366 Score = 29.1 bits (62), Expect = 3.4 Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 2/91 (2%) Frame = -1 Query: 458 IEVFPVPSSPITSILYKCSLRSELAVACEPLEFGFCLGDMF--CSFTYVRNVKIYKNKSN 285 +E P + I K +EL AC L+ LG +F C++TY K+ ++ Sbjct: 143 LESMRAPELSVYYIPSKTQKNAELLAACCDLD----LGGLFPHCAYTYTYKYKMIADRLW 198 Query: 284 MAIYEMNIEFSRICTSASHNRSLIKASRSSY 192 A++E+ R ++A S ++ S S+ Sbjct: 199 SAMHEVAAAAKRDMSTAMPTASALRDSPMSF 229 >SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13) Length = 1383 Score = 29.1 bits (62), Expect = 3.4 Identities = 16/63 (25%), Positives = 35/63 (55%), Gaps = 5/63 (7%) Frame = +1 Query: 415 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDF-----ALKVLNWDANTIIRLQLWD 579 K+ ++G G GKT+++K F +++ + +D L++ N D N +R++++D Sbjct: 569 KVTIVGGEGAGKTTLVKAL---GFKYNWKLSTVMDSEERTKGLEISNIDLNESLRMKVFD 625 Query: 580 IAG 588 + G Sbjct: 626 LGG 628 >SB_6223| Best HMM Match : Ras (HMM E-Value=0) Length = 1665 Score = 28.7 bits (61), Expect = 4.5 Identities = 11/33 (33%), Positives = 20/33 (60%) Frame = +1 Query: 412 YKILVIGELGTGKTSIIKRYVHQFFSQHYRATI 510 YK++V+G G GK+++ +++ F Y TI Sbjct: 12 YKLVVVGGGGVGKSALTIQFIQSHFVSDYDPTI 44 >SB_1071| Best HMM Match : Ras (HMM E-Value=0) Length = 228 Score = 28.7 bits (61), Expect = 4.5 Identities = 12/33 (36%), Positives = 21/33 (63%) Frame = +1 Query: 412 YKILVIGELGTGKTSIIKRYVHQFFSQHYRATI 510 YK++V+G G GK+++ ++V F + Y TI Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTI 36 >SB_4257| Best HMM Match : Collagen (HMM E-Value=0.00073) Length = 863 Score = 28.3 bits (60), Expect = 5.9 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 4/43 (9%) Frame = +1 Query: 328 NEQNMSPKQKPNSSGSHATASSE----RREHLYKILVIGELGT 444 +E + SPK+KPN++ HAT S + + + VIG L T Sbjct: 739 SELSSSPKKKPNNNHDHATKSRTYYRLSKTAVMMVAVIGVLST 781 >SB_28305| Best HMM Match : MMR_HSR1 (HMM E-Value=0.0054) Length = 425 Score = 27.9 bits (59), Expect = 7.8 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = +1 Query: 355 KPNSSGSHATASSERREHLYKILVIGELGTGKTSIIK 465 K S SH +S E + L + LV+G +G+GK+ I+ Sbjct: 100 KATSLWSHGASSKEPAKEL-RFLVLGPVGSGKSKFIE 135 >SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) Length = 2748 Score = 27.9 bits (59), Expect = 7.8 Identities = 10/30 (33%), Positives = 20/30 (66%) Frame = +1 Query: 403 EHLYKILVIGELGTGKTSIIKRYVHQFFSQ 492 E ++++ V+G G GK+S+ RY+ F++ Sbjct: 2596 ETMFRLCVVGSGGVGKSSVTIRYLKNEFTE 2625 >SB_32548| Best HMM Match : Myosin_head (HMM E-Value=2.9e-17) Length = 546 Score = 27.9 bits (59), Expect = 7.8 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = +1 Query: 418 ILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNW 543 +L+ GE G GKT KR + + +T G F +LN+ Sbjct: 112 MLISGESGAGKTEASKRILEYLAAISTSSTEGAPFGGHILNY 153 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,051,048 Number of Sequences: 59808 Number of extensions: 379310 Number of successful extensions: 1205 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 1121 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1201 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1705624125 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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