Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_D09
(648 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47069-3|CAE17781.1| 141|Caenorhabditis elegans Hypothetical pr... 66 2e-11
U67956-1|AAB07690.2| 157|Caenorhabditis elegans Hypothetical pr... 54 9e-08
AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical... 51 6e-07
AL110500-18|CAB54478.1| 118|Caenorhabditis elegans Hypothetical... 49 2e-06
AL110500-20|CAI79282.1| 110|Caenorhabditis elegans Hypothetical... 48 4e-06
AF068714-8|AAC17809.2| 86|Caenorhabditis elegans Hypothetical ... 46 2e-05
AL032626-6|CAA21526.1| 132|Caenorhabditis elegans Hypothetical ... 45 4e-05
U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glut... 44 7e-05
AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type ion... 44 7e-05
AC084153-15|AAK84589.2| 152|Caenorhabditis elegans Hypothetical... 43 2e-04
AL032626-7|CAA21544.1| 79|Caenorhabditis elegans Hypothetical ... 42 4e-04
AF068714-9|AAC17810.1| 87|Caenorhabditis elegans Hypothetical ... 42 4e-04
AL032626-23|CAE17974.1| 88|Caenorhabditis elegans Hypothetical... 40 0.001
AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical ... 37 0.011
Z81464-6|CAB03856.2| 102|Caenorhabditis elegans Hypothetical pr... 36 0.025
AC006610-4|AAK85450.1| 246|Caenorhabditis elegans Hypothetical ... 31 0.93
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 30 1.6
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 30 1.6
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 29 2.8
U41007-2|AAA82265.1| 248|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z82058-1|CAB04862.2| 352|Caenorhabditis elegans Hypothetical pr... 28 6.6
AL031627-11|CAA20962.2| 355|Caenorhabditis elegans Hypothetical... 28 6.6
Z78419-7|CAC42290.1| 1601|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 27 8.7
AF159144-1|AAF80368.1| 1601|Caenorhabditis elegans RRF-1 protein. 27 8.7
>Z47069-3|CAE17781.1| 141|Caenorhabditis elegans Hypothetical
protein F36G3.3 protein.
Length = 141
Score = 66.5 bits (155), Expect = 2e-11
Identities = 28/80 (35%), Positives = 43/80 (53%)
Frame = +3
Query: 111 TTMNIAPVGPNPANLVCPSCRATIVTKVNRKATTKTHVIALLLCLFLCWPCVCVPYCMDS 290
T+ I + P+ L CP CR IVT+ T + L LF CW C +P+C+ S
Sbjct: 61 TSTIIIRLEPHATKLQCPYCRMDIVTRTKSVYGLLTWIFFAALFLFGCWCCCFLPFCLRS 120
Query: 291 CQNADHYCPNCNSYLGTYQQ 350
C++ H CPNC + +G +++
Sbjct: 121 CKDIIHTCPNCRAMIGVHRR 140
>U67956-1|AAB07690.2| 157|Caenorhabditis elegans Hypothetical
protein F16F9.1 protein.
Length = 157
Score = 54.0 bits (124), Expect = 9e-08
Identities = 28/81 (34%), Positives = 43/81 (53%)
Frame = +3
Query: 96 TSFLITTMNIAPVGPNPANLVCPSCRATIVTKVNRKATTKTHVIALLLCLFLCWPCVCVP 275
T ++TT AP + C SC + T + T ++ +L+ L +P VP
Sbjct: 73 TVVIVTTPKPAPSFAS-YETTCYSCGKYVHTLPKFVIGSLTWIVFILV-LICFFPLAFVP 130
Query: 276 YCMDSCQNADHYCPNCNSYLG 338
+C+DSC++A HYCP CN+ LG
Sbjct: 131 FCLDSCKDAHHYCPRCNALLG 151
>AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical
protein Y41C4A.11 protein.
Length = 386
Score = 51.2 bits (117), Expect = 6e-07
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +3
Query: 156 VCPSCRATIVTKVNRKATTKTHVIALLLCLF----LCWPCVCVPYCMDSCQNADHYCPNC 323
VCP C+ TI+T V TT + L+C F CWP + + C D ++ DH CPNC
Sbjct: 35 VCPKCQTTIMTSV----TTHIGMCWWLICFFGTFLFCWP-ILICLCFDVSKDVDHNCPNC 89
Query: 324 NSYLGT 341
L T
Sbjct: 90 GLLLAT 95
>AL110500-18|CAB54478.1| 118|Caenorhabditis elegans Hypothetical
protein Y87G2A.18 protein.
Length = 118
Score = 49.2 bits (112), Expect = 2e-06
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Frame = +3
Query: 114 TMNIAPVGPNPANLVCPSCRATIVTKVNRKATTKTHVIALLLC-----LFLC-WPCVCVP 275
T +P P + CP C+ IV+ + R A +I +L LF+ W CVP
Sbjct: 33 TSRTSPYNVMPIEMDCPHCQNHIVSHIERVAGVLPWIIFAILAFLGIFLFIIPWCFCCVP 92
Query: 276 YCMDSCQNADHYCPNCNSYLGTYQQ 350
+ +D + +H CP C +LG + +
Sbjct: 93 FFLDQLLDVNHSCPACKKFLGRFNR 117
>AL110500-20|CAI79282.1| 110|Caenorhabditis elegans Hypothetical
protein Y87G2A.19 protein.
Length = 110
Score = 48.4 bits (110), Expect = 4e-06
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Frame = +3
Query: 144 PANLVCPSCRA---TIVTKVNRKATTKTHVIALL-----LCLFLCWPCVCVPYCMDSCQN 299
P L CP C+ T + VN T + I L+ L LF W VP+C+++ ++
Sbjct: 33 PQLLDCPRCKVHGETELRFVNGFFTYVSFFIILIFGFAILPLFFLW----VPFCVETFKD 88
Query: 300 ADHYCPNCNSYLGTYQQ 350
A+HYCP+C +++GTY++
Sbjct: 89 AEHYCPSCRAWIGTYRR 105
>AF068714-8|AAC17809.2| 86|Caenorhabditis elegans Hypothetical
protein B0348.2 protein.
Length = 86
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = +3
Query: 144 PANLVCPSCRATIVTKVNRKATTKTHVIALLLCLFLCWPCVCVPYCMDSCQNADHYCPNC 323
P + C C+ VT+ + V+ ++ CL L WP +C C DS ++ HYCP+C
Sbjct: 18 PHQVFCQKCQCNQVTRTETQLGACWWVVFIIGCL-LFWP-ICYWLCCDSSKDTMHYCPSC 75
Query: 324 NSYL 335
+ L
Sbjct: 76 GTLL 79
>AL032626-6|CAA21526.1| 132|Caenorhabditis elegans Hypothetical
protein Y37D8A.6 protein.
Length = 132
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +3
Query: 144 PANLVCPSCRATIVTKVNRKATTKTHVIALLLCLFLCWPCVCVPYCMDSCQNADHYCPNC 323
P CP C + T+V R + + L L LF+ +P +C +C+D +++ H CPNC
Sbjct: 66 PYTEFCPRCNTNVCTRVERTMGFCSWTM-LFLGLFVFFPLLCC-FCLDGFKDSRHSCPNC 123
Query: 324 NSYL 335
+ L
Sbjct: 124 GTIL 127
>U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glutamate
receptor protein1 protein.
Length = 1025
Score = 44.4 bits (100), Expect = 7e-05
Identities = 19/72 (26%), Positives = 34/72 (47%)
Frame = +3
Query: 144 PANLVCPSCRATIVTKVNRKATTKTHVIALLLCLFLCWPCVCVPYCMDSCQNADHYCPNC 323
P L C CR + + V+R+ + L + WPC +P + S + H CP C
Sbjct: 949 PLVLFCSRCRNIVESDVHRETGLFAFLSCFLFAILFLWPCSPLPCFLSSFSDFVHICPLC 1008
Query: 324 NSYLGTYQQ*QS 359
+ +G +++ +S
Sbjct: 1009 SHIMGRFRRARS 1020
>AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type
ionotropic glutamatereceptor NMR-1 protein.
Length = 1025
Score = 44.4 bits (100), Expect = 7e-05
Identities = 19/72 (26%), Positives = 34/72 (47%)
Frame = +3
Query: 144 PANLVCPSCRATIVTKVNRKATTKTHVIALLLCLFLCWPCVCVPYCMDSCQNADHYCPNC 323
P L C CR + + V+R+ + L + WPC +P + S + H CP C
Sbjct: 949 PLVLFCSRCRNIVESDVHRETGLFAFLSCFLFAILFLWPCSPLPCFLSSFSDFVHICPLC 1008
Query: 324 NSYLGTYQQ*QS 359
+ +G +++ +S
Sbjct: 1009 SHIMGRFRRARS 1020
>AC084153-15|AAK84589.2| 152|Caenorhabditis elegans Hypothetical
protein Y22D7AL.15 protein.
Length = 152
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +3
Query: 159 CPSCRATIVTKVNRKATTKTHVIALLLCLFLCWPCVCVPYCMDSCQNADHYCPNCNSYL 335
CP C+ ++ T+ T +I + CWP + C S ++ H+CPNC + L
Sbjct: 88 CPRCQTSVTTRTVHSIGTCWWIILFIGVFVFCWPILYCLCCAGS-KDVKHFCPNCGTML 145
>AL032626-7|CAA21544.1| 79|Caenorhabditis elegans Hypothetical
protein Y37D8A.8 protein.
Length = 79
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = +3
Query: 144 PANLVCPSCRATIVTKVNRKATTKTHVIALLLCLFLCWPCVCVPYCMDSCQNADHYCPNC 323
P CP CR T+VT V + +I ++L +F+ + + + C+D ++A H+CPNC
Sbjct: 12 PYQEYCPRCRCTVVTVVEYEMGCFAWLI-IILIIFVAFFLIYILCCID-IRDAIHHCPNC 69
Query: 324 NSYL 335
L
Sbjct: 70 GMVL 73
>AF068714-9|AAC17810.1| 87|Caenorhabditis elegans Hypothetical
protein B0348.1 protein.
Length = 87
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +3
Query: 144 PANLVCPSCRATIVTKVNRKATTKTHVIALLLCLFLCWPCVCVPYCMDSCQNADHYCPNC 323
P + CP C+ T++ + IA + FL +P +C C S ++ HYCP+C
Sbjct: 18 PYSEYCPKCQCNHTTRMESRRGN-CWWIAFFIGFFLFFP-ICYWLCCQSSKDTLHYCPSC 75
Query: 324 NSYLGTYQ 347
+ L T Q
Sbjct: 76 GTLLATRQ 83
>AL032626-23|CAE17974.1| 88|Caenorhabditis elegans Hypothetical
protein Y37D8A.26 protein.
Length = 88
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +3
Query: 159 CPSCRATIVTKVNRKATTKTHVIALLLCLFLCWPCVCVPYCMDSCQNADHYCPNCNSYLG 338
C +C+ T+ TK + + + CLFL PC V + + H CPNCN LG
Sbjct: 27 CTNCQETVTTKTEQVFGMLNFAL-FITCLFL--PCFIVCFWCRCFMDVHHRCPNCNKSLG 83
>AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical
protein Y40H7A.11 protein.
Length = 124
Score = 37.1 bits (82), Expect = 0.011
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +3
Query: 159 CPSCRATIVTKVNRKATTKTHVIALL-LCLFLCWPCVCVPYCMDSCQNADHYCPNCNSYL 335
C C+ + T+V K + A L C F C + P D A H+CPNC S L
Sbjct: 63 CTRCQTLVQTRVEHKIGIMWWLCATLSFCFFFCCYLLFFPITKD----AQHFCPNCGSLL 118
>Z81464-6|CAB03856.2| 102|Caenorhabditis elegans Hypothetical
protein C08E8.1 protein.
Length = 102
Score = 35.9 bits (79), Expect = 0.025
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +3
Query: 159 CPSCRATIVTKVNRKATTKTHVIALLLCLFLCWPCVCVPY----CMDSCQNADHYCPNCN 326
CP+C +T VN T V L+C F C C P+ C D ++ +H CP+C
Sbjct: 36 CPTCEKAYMTSVN----THIGVCWWLICFFGTVLC-CFPFLFFLCCDVSKDVNHNCPSCG 90
Query: 327 SYL 335
L
Sbjct: 91 MLL 93
>AC006610-4|AAK85450.1| 246|Caenorhabditis elegans Hypothetical
protein C30F12.4 protein.
Length = 246
Score = 30.7 bits (66), Expect = 0.93
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = +3
Query: 153 LVCPSCRATIVTKVNRKATTKTHVIALLLC--LFLCWP--CVCVPYCMDSC 293
LVCP CR I+ + + K + + C L C P C+C Y +D+C
Sbjct: 173 LVCPKCRKGIIMRKQDRLRKKILMCLAVCCCPLTCCLPLICICCNY-VDAC 222
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 267 CVPYCMDSCQNADHYCPNCNSYLGTYQQ 350
C P C SCQN + P+ N + QQ
Sbjct: 82 CAPACQQSCQNQCQFAPSMNECQSSCQQ 109
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 267 CVPYCMDSCQNADHYCPNCNSYLGTYQQ 350
C P C SCQN + P+ N + QQ
Sbjct: 83 CAPACQQSCQNQCQFAPSMNECQSSCQQ 110
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
F55H12.3 protein.
Length = 2972
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +3
Query: 261 CVCVP-YCMDSCQNADHYCPNCNSYLG 338
CVC+P Y D C N H C + N + G
Sbjct: 1947 CVCLPDYTGDYCDNQIHSCSDINCFNG 1973
>U41007-2|AAA82265.1| 248|Caenorhabditis elegans Hypothetical
protein C33H5.6 protein.
Length = 248
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -3
Query: 163 GHTRLAGFGPTGAIFIVVIKNDVI 92
GHT L F P G +F V K+D I
Sbjct: 153 GHTPLIAFDPDGILFAVATKSDTI 176
>Z82058-1|CAB04862.2| 352|Caenorhabditis elegans Hypothetical
protein T27C5.1 protein.
Length = 352
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 127 AIFIVVIKNDVIAPIPETPLIINTAKFVDLDF 32
A ++++ K + I +TPL+IN + V DF
Sbjct: 47 AFYVILYKTPIAMKISKTPLLINHSSCVIFDF 78
>AL031627-11|CAA20962.2| 355|Caenorhabditis elegans Hypothetical
protein Y102A5C.21 protein.
Length = 355
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 127 AIFIVVIKNDVIAPIPETPLIINTAKFVDLDF 32
A+++++ K + I + PL+IN + V LDF
Sbjct: 47 ALYVIIYKTPIAMKISKIPLLINHSLCVILDF 78
>Z78419-7|CAC42290.1| 1601|Caenorhabditis elegans Hypothetical
protein F26A3.8 protein.
Length = 1601
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -3
Query: 481 VQTLNGSRITKLLLF*VCILSYNNYKITYKSHEKFI*FNVQDCYCWYVPKYELQLGQ 311
+Q + GS T LL F +L Y+I KS ++ QDC C++ +E++ Q
Sbjct: 20 LQVIEGSIDTMLLTF-TSVL--RKYEIEIKSRQETQIVEEQDCDCFFEINFEVESEQ 73
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +3
Query: 267 CVPYCMDSCQNADHYCPNCNSYLGTYQQ 350
C P C SCQN P+ + T QQ
Sbjct: 84 CAPACQQSCQNQCQSAPSVSQCQSTCQQ 111
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +3
Query: 267 CVPYCMDSCQNADHYCPNCNSYLGTYQQ 350
C P C SCQN P+ + T QQ
Sbjct: 84 CAPACQQSCQNQCQSAPSVSQCQSTCQQ 111
>AF159144-1|AAF80368.1| 1601|Caenorhabditis elegans RRF-1 protein.
Length = 1601
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -3
Query: 481 VQTLNGSRITKLLLF*VCILSYNNYKITYKSHEKFI*FNVQDCYCWYVPKYELQLGQ 311
+Q + GS T LL F +L Y+I KS ++ QDC C++ +E++ Q
Sbjct: 20 LQVIEGSIDTMLLTF-TSVL--RKYEIEIKSRQETQIVEEQDCDCFFEINFEVESEQ 73
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,556,298
Number of Sequences: 27780
Number of extensions: 314249
Number of successful extensions: 1092
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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