Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_D09
         (648 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    23   1.9  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    23   3.4  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    21   7.8  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    21   7.8  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   7.8  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   7.8  

>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 7/23 (30%), Positives = 17/23 (73%)
 Frame = -3

Query: 568 NSYYNFNDHFSNHTKQCLKVLNF 500
           N+Y N+N++++N+ K+    +N+
Sbjct: 335 NNYNNYNNNYNNNYKKLYYNINY 357



 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 421 SYNNYKITYKSHEKFI*FNV 362
           +YNNY   Y ++ K + +N+
Sbjct: 336 NYNNYNNNYNNNYKKLYYNI 355


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 421 SYNNYKITYKSHEKFI*FNV 362
           +YNNY   Y ++ K + +N+
Sbjct: 93  NYNNYNNNYNNYNKKLYYNI 112


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = +1

Query: 388 DFCMLSCNCYMIEYRLKIIITLLYDYHLMFALFLEIFRNLKPLNIVLYDLKN 543
           D C+LS   Y  +      +  + DY +   + L   R     NI +YDLK+
Sbjct: 112 DKCILSSESYNPQ------VDFVADYKIEGKVLLLPVRGAGKSNITMYDLKS 157


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/35 (25%), Positives = 20/35 (57%)
 Frame = -3

Query: 583 KFXQTNSYYNFNDHFSNHTKQCLKVLNF*ISPRKV 479
           K+   N+Y N+N++  N+  + L   N+ I+  ++
Sbjct: 323 KYSNYNNYNNYNNNNYNNYNKKLYYKNYIINIEQI 357


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 13/46 (28%), Positives = 17/46 (36%)
 Frame = +2

Query: 206 YH*NPRHRAPPMFVFVLAVCMCTVLYGFLPERXXXXXXXXXVFGDI 343
           YH +       MF+  LAV    V    LP           +FGD+
Sbjct: 91  YHTSKLRNVTNMFIVSLAVADLMVGLAVLPFSATWEVFKVWIFGDL 136


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
 Frame = +3

Query: 87  GAITSFLITTMNIAPVGPNPANL---VCPSCRATIVTKVNRKATTKTHVIAL 233
           G +TS L      AP G   ANL   + P  R+    K  R+  T+   + L
Sbjct: 234 GVVTSPLSQQQQAAPQGAASANLPSPLYPWMRSQFERKRGRQTYTRYQTLEL 285


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,461
Number of Sequences: 438
Number of extensions: 4506
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)