Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_D07
         (467 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    24   0.94 
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    22   3.8  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    22   3.8  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   3.8  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    22   3.8  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    21   5.0  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    21   5.0  
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    21   5.0  
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    21   6.6  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   8.7  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 350 LGFGEQNDGCRGKVNLFP 403
           +G GE  D CRGK+ L P
Sbjct: 639 IGGGEFGDVCRGKLKLPP 656


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/24 (37%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = +2

Query: 377 CRGKVNLFP*QQP--RFQCQSIRH 442
           C+G++N+FP   P   F  +SI +
Sbjct: 186 CQGRLNIFPFDDPLCSFAIESISY 209


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/24 (37%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = +2

Query: 377 CRGKVNLFP*QQP--RFQCQSIRH 442
           C+G++N+FP   P   F  +SI +
Sbjct: 186 CQGRLNIFPFDDPLCSFAIESISY 209


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/24 (37%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = +2

Query: 377 CRGKVNLFP*QQP--RFQCQSIRH 442
           C+G++N+FP   P   F  +SI +
Sbjct: 237 CQGRLNIFPFDDPLCSFAIESISY 260


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/24 (37%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = +2

Query: 377 CRGKVNLFP*QQP--RFQCQSIRH 442
           C+G++N+FP   P   F  +SI +
Sbjct: 186 CQGRLNIFPFDDPLCSFAIESISY 209


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -2

Query: 451 MFLVANALALKSWLLLWEEIYFTPAAVILFTET 353
           +++ +  + + SW+  W     TPA V L   T
Sbjct: 227 IYIPSGLIVIISWVSFWLNRNATPARVALGVTT 259


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -2

Query: 451 MFLVANALALKSWLLLWEEIYFTPAAVILFTET 353
           +++ +  + + SW+  W     TPA V L   T
Sbjct: 227 IYIPSGLIVIISWVSFWLNRNATPARVALGVTT 259


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -2

Query: 451 MFLVANALALKSWLLLWEEIYFTPAAVILFTET 353
           +++ +  + + SW+  W     TPA V L   T
Sbjct: 166 IYIPSGLIVIISWVSFWLNRNATPARVALGVTT 198


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 12/39 (30%), Positives = 25/39 (64%)
 Frame = -3

Query: 120 LRLILILFDVVTRLFNKHVTAVDADQENRH*EQLSEHLR 4
           ++ +L+L  +VT +  K V ++ ADQ     E+L++++R
Sbjct: 3   VKSVLLLITIVTFVALKPVKSMSADQV----EKLAKNMR 37


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/40 (25%), Positives = 15/40 (37%)
 Frame = +1

Query: 91  YIEQYEDQPEQWANSRVRRQAGALTINSDGTSGAMVKVPI 210
           Y      + E W N+ V R       NS+  + + V   I
Sbjct: 264 YFHSLASRVESWVNTSVIRNYTLFNENSEAAARSFVPFSI 303


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,656
Number of Sequences: 438
Number of extensions: 3129
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)