Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_D06
(495 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical pr... 37 0.009
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 33 0.15
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 33 0.15
Z83216-11|CAB05679.2| 404|Caenorhabditis elegans Hypothetical p... 32 0.20
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 30 0.80
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 29 1.4
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 28 3.2
Z81112-6|CAB03277.1| 673|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z77136-10|CAB00887.1| 673|Caenorhabditis elegans Hypothetical p... 28 4.3
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 27 7.5
U50300-6|AAC48109.1| 642|Caenorhabditis elegans Hypothetical pr... 27 7.5
AF067216-11|AAL02458.1| 707|Caenorhabditis elegans Hypothetical... 27 7.5
AC024881-9|AAK71410.1| 588|Caenorhabditis elegans Hypothetical ... 27 9.9
>U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical
protein K02G10.5 protein.
Length = 655
Score = 36.7 bits (81), Expect = 0.009
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 184 IEKCAENCISTPEYNPVCGSDNK-TYKNQGRLFCAQNCGVKVTLARQAPCPSS 339
+E C+ENC +NPVC D+K T+ + CA G+K + C S
Sbjct: 442 LETCSENCHCDSFFNPVCSEDSKLTFLSPCHAGCADMPGIKFGASNWTNCGCS 494
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 32.7 bits (71), Expect = 0.15
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 214 TPEYNPVCGSDNKTYKNQGRL 276
T E+ VCGSD KTY N+ RL
Sbjct: 469 TDEFKEVCGSDGKTYSNECRL 489
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 190 KCAENCISTPEYNPVCGSDNKTYKNQ 267
KC+E C + VCG+D KTY N+
Sbjct: 318 KCSEQCTMNSAH--VCGTDGKTYLNE 341
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +1
Query: 187 EKCAENCISTPEYNPVCGSDNKTYKNQGRLFCAQNCGVKVTL 312
+ C N + VCGSD TY N L C +K+TL
Sbjct: 865 QSCNMNHLGIVANMTVCGSDGTTYSNLCELKMFA-CNIKLTL 905
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 32.7 bits (71), Expect = 0.15
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 214 TPEYNPVCGSDNKTYKNQGRL 276
T E+ VCGSD KTY N+ RL
Sbjct: 477 TDEFKEVCGSDGKTYSNECRL 497
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 190 KCAENCISTPEYNPVCGSDNKTYKNQ 267
KC+E C + VCG+D KTY N+
Sbjct: 326 KCSEQCTMNSAH--VCGTDGKTYLNE 349
>Z83216-11|CAB05679.2| 404|Caenorhabditis elegans Hypothetical
protein C08F11.13 protein.
Length = 404
Score = 32.3 bits (70), Expect = 0.20
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Frame = +3
Query: 273 TILCPKLWSQSDFGQASPVPVFIKVILIKYNLYFILIKC----SIHYFVIWKLP*IAVFL 440
T++C L+S+ + SP V + + K+ L+F+LI C SI +VI K+ + VF
Sbjct: 307 TVIC--LFSKIVYFHKSPKNVETRFFMKKWYLWFLLINCVIWSSIPLYVIGKVGNV-VFS 363
Query: 441 CNTVFLYLFILCL 479
N++F L C+
Sbjct: 364 PNSLFWALLTFCV 376
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 30.3 bits (65), Expect = 0.80
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +2
Query: 119 KHRYQVKGKHQLLALVEHHDKQLRNARRIAFQHQNTTPCVVAIIKLTKTREDYF 280
+ R++ + +H AL +H ++L +R A + CV+++IK + E F
Sbjct: 81 EQRHRRRRRHNETALEDHLSEKLSREKRAAAHIMRSRKCVISVIKKMSSMECSF 134
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 202 NCISTPEYNPVCGSDNKTYKNQGRLFCAQ 288
+C PVCG+DN TY N L C Q
Sbjct: 18 DCDCPSVIRPVCGTDNVTYNNLCFLRCVQ 46
Score = 29.1 bits (62), Expect = 1.9
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 175 RQTIEKCAENCISTPEYNPVCGSDNKTYKN 264
R + + C NC +T E++PVC ++ Y+N
Sbjct: 109 RCSSKDCNHNCTNT-EFDPVCDTNGSVYRN 137
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 28.3 bits (60), Expect = 3.2
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -3
Query: 343 LMKTGTGLAWPKSL*LHNFGHKIVFPGFCKFYYRYHTRGCILVLKCNS 200
L KTG L K + ++NF K + G C RY + KCN+
Sbjct: 950 LKKTGVKLQTIKDIEMYNFIEKGIRGGICNAMLRYSRANNRHLKKCNT 997
>Z81112-6|CAB03277.1| 673|Caenorhabditis elegans Hypothetical
protein ZC376.3 protein.
Length = 673
Score = 27.9 bits (59), Expect = 4.3
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +1
Query: 199 ENCISTPEYNPVCGSD-NKTYKN 264
+ + T EY P C SD KTYKN
Sbjct: 73 DGILETKEYKPACMSDAKKTYKN 95
>Z77136-10|CAB00887.1| 673|Caenorhabditis elegans Hypothetical
protein ZC376.3 protein.
Length = 673
Score = 27.9 bits (59), Expect = 4.3
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +1
Query: 199 ENCISTPEYNPVCGSD-NKTYKN 264
+ + T EY P C SD KTYKN
Sbjct: 73 DGILETKEYKPACMSDAKKTYKN 95
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +1
Query: 178 QTIEKCAENCISTPEYNPVCGSDNKTYKNQGRLFCAQN 291
Q ++ C + T E NP S+ YKN R+ C N
Sbjct: 284 QCVDACETETV-TDEANPCKFSNAAKYKNGSRIICGPN 320
>U50300-6|AAC48109.1| 642|Caenorhabditis elegans Hypothetical
protein R03H4.1 protein.
Length = 642
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 393 IHYFVIWKLP*IAVFLCNTVFLYLFILCLNVSS 491
+ Y V W P I +FL NTV Y+F L + S
Sbjct: 296 VMYLVHW--PIITIFLSNTVKSYIFCTSLTILS 326
>AF067216-11|AAL02458.1| 707|Caenorhabditis elegans Hypothetical
protein C35E7.2a protein.
Length = 707
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +3
Query: 273 TILCPKLWSQSDFGQASPVPVFIKVILIKYNLYFILIKCSI 395
T +CP + + F + + +V+L K L+F +IKCS+
Sbjct: 175 TKICPHVSQKIYFCKTTKSESVHQVVLNKLTLHFEIIKCSV 215
>AC024881-9|AAK71410.1| 588|Caenorhabditis elegans Hypothetical
protein Y97E10B.1 protein.
Length = 588
Score = 26.6 bits (56), Expect = 9.9
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 250 YYRYHTRGCILVLKCNSPRI 191
YYRYH G I +KC P++
Sbjct: 523 YYRYHYSGRIGEIKCPGPQL 542
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,973,827
Number of Sequences: 27780
Number of extensions: 257482
Number of successful extensions: 572
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 572
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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