Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_D04
         (504 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    22   3.6  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   6.3  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   6.3  

>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 99  ILMAYITKQVLAQVSAY 149
           I++A ITK  L QVS +
Sbjct: 118 IMLAIITKMTLTQVSTW 134


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 332 HKMWS*SLPIKYTF*NLSYNCTKTIIYYID 421
           H   S  LP+ ++  + SYNC     + ID
Sbjct: 219 HSESSKVLPLLFSVSSSSYNCEVLFSFLID 248


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 73  YNSLYFIQSSLWLTL 117
           +NSLY +   LW+T+
Sbjct: 247 HNSLYSLHLLLWITV 261


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,689
Number of Sequences: 336
Number of extensions: 2972
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)