BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I09A02NGRL0002_D04 (504 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_48621| Best HMM Match : SFT2 (HMM E-Value=6.6) 28 5.0 SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0 SB_36891| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0 SB_50434| Best HMM Match : XPA_C (HMM E-Value=2.1e-05) 27 6.6 >SB_48621| Best HMM Match : SFT2 (HMM E-Value=6.6) Length = 97 Score = 27.9 bits (59), Expect = 5.0 Identities = 10/39 (25%), Positives = 24/39 (61%) Frame = +1 Query: 7 FFFFFSRSKQ*AYILEVDLYTFYNSLYFIQSSLWLTLQN 123 F+F++S + AY+ ++ F L++IQ++ W ++ + Sbjct: 43 FYFYYSEVE--AYVNSTTIFCFNCVLFYIQATYWFSISS 79 >SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2529 Score = 27.9 bits (59), Expect = 5.0 Identities = 10/39 (25%), Positives = 24/39 (61%) Frame = +1 Query: 7 FFFFFSRSKQ*AYILEVDLYTFYNSLYFIQSSLWLTLQN 123 F+F++S + AY+ ++ F L++IQ++ W ++ + Sbjct: 716 FYFYYSEVE--AYVNSTTIFCFNCVLFYIQATYWFSISS 752 >SB_36891| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2124 Score = 27.9 bits (59), Expect = 5.0 Identities = 10/39 (25%), Positives = 24/39 (61%) Frame = +1 Query: 7 FFFFFSRSKQ*AYILEVDLYTFYNSLYFIQSSLWLTLQN 123 F+F++S + AY+ ++ F L++IQ++ W ++ + Sbjct: 1338 FYFYYSEVE--AYVNSTTIFCFNCVLFYIQATYWFSISS 1374 >SB_50434| Best HMM Match : XPA_C (HMM E-Value=2.1e-05) Length = 830 Score = 27.5 bits (58), Expect = 6.6 Identities = 13/38 (34%), Positives = 24/38 (63%) Frame = +1 Query: 40 AYILEVDLYTFYNSLYFIQSSLWLTLQNKSWHKYLLML 153 A++ ++D++ + + FI SSL + LQ + H YL +L Sbjct: 331 AHVADMDVFRIGHVVKFICSSLNIELQQTNAHDYLSVL 368 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,068,989 Number of Sequences: 59808 Number of extensions: 279415 Number of successful extensions: 559 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 518 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 558 length of database: 16,821,457 effective HSP length: 77 effective length of database: 12,216,241 effective search space used: 1099461690 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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