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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_D04
         (504 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_48621| Best HMM Match : SFT2 (HMM E-Value=6.6)                      28   5.0  
SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.0  
SB_36891| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.0  
SB_50434| Best HMM Match : XPA_C (HMM E-Value=2.1e-05)                 27   6.6  

>SB_48621| Best HMM Match : SFT2 (HMM E-Value=6.6)
          Length = 97

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 10/39 (25%), Positives = 24/39 (61%)
 Frame = +1

Query: 7   FFFFFSRSKQ*AYILEVDLYTFYNSLYFIQSSLWLTLQN 123
           F+F++S  +  AY+    ++ F   L++IQ++ W ++ +
Sbjct: 43  FYFYYSEVE--AYVNSTTIFCFNCVLFYIQATYWFSISS 79


>SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2529

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 10/39 (25%), Positives = 24/39 (61%)
 Frame = +1

Query: 7   FFFFFSRSKQ*AYILEVDLYTFYNSLYFIQSSLWLTLQN 123
           F+F++S  +  AY+    ++ F   L++IQ++ W ++ +
Sbjct: 716 FYFYYSEVE--AYVNSTTIFCFNCVLFYIQATYWFSISS 752


>SB_36891| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2124

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 10/39 (25%), Positives = 24/39 (61%)
 Frame = +1

Query: 7    FFFFFSRSKQ*AYILEVDLYTFYNSLYFIQSSLWLTLQN 123
            F+F++S  +  AY+    ++ F   L++IQ++ W ++ +
Sbjct: 1338 FYFYYSEVE--AYVNSTTIFCFNCVLFYIQATYWFSISS 1374


>SB_50434| Best HMM Match : XPA_C (HMM E-Value=2.1e-05)
          Length = 830

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = +1

Query: 40  AYILEVDLYTFYNSLYFIQSSLWLTLQNKSWHKYLLML 153
           A++ ++D++   + + FI SSL + LQ  + H YL +L
Sbjct: 331 AHVADMDVFRIGHVVKFICSSLNIELQQTNAHDYLSVL 368


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,068,989
Number of Sequences: 59808
Number of extensions: 279415
Number of successful extensions: 559
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 558
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1099461690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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