Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_D04
         (504 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    23   1.8  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    22   3.2  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    22   3.2  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    22   4.2  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    21   5.5  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    21   5.5  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   5.5  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   9.6  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   9.6  

>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 251 NYRLQYLLTYHHNNCTHMILLHYNN 325
           NY+  Y   Y++NN  +   L+Y N
Sbjct: 95  NYKYNYNNKYNYNNNNYNKKLYYKN 119


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 469 TFCKKCKPIRNENL 428
           T CKKC  I+ +NL
Sbjct: 73  TQCKKCTEIQKQNL 86


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 469 TFCKKCKPIRNENL 428
           T CKKC  I+ +NL
Sbjct: 73  TQCKKCTEIQKQNL 86


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 457 FYKMSTNNALLNKY 498
           FY+  T N LLN Y
Sbjct: 48  FYRQDTKNNLLNAY 61


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +1

Query: 160 NMLSIIILIKWNNYYHYYNKIASIILAHFIKLQVTIL 270
           ++L  +I+I WN      +++  +I   F+K   TIL
Sbjct: 310 SILVTVIIINWNFRGPRTHRMPQLIRKIFLKYLPTIL 346


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 338 FYETYCCNAIGSCVY 294
           F+  YC +AI  C+Y
Sbjct: 48  FWLGYCNSAINPCIY 62


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 338 FYETYCCNAIGSCVY 294
           F+  YC +AI  C+Y
Sbjct: 496 FWLGYCNSAINPCIY 510


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +1

Query: 196 NYYHYYNKIASIILAHFI 249
           NYY   NKI    L H I
Sbjct: 392 NYYFESNKIDETTLKHLI 409


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +1

Query: 196 NYYHYYNKIASIILAHFI 249
           NYY   NKI    L H I
Sbjct: 392 NYYFESNKIDETTLKHLI 409


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,832
Number of Sequences: 438
Number of extensions: 3332
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)