Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_D02
(558 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56874| Best HMM Match : RVT_1 (HMM E-Value=4.5e-38) 37 0.013
SB_36818| Best HMM Match : RVT_1 (HMM E-Value=8e-35) 32 0.28
SB_10620| Best HMM Match : zf-C2H2 (HMM E-Value=0.012) 32 0.28
SB_50300| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.28
SB_32967| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_49943| Best HMM Match : zf-nanos (HMM E-Value=9.2) 31 0.64
SB_46439| Best HMM Match : RVT_1 (HMM E-Value=4.8e-25) 31 0.64
SB_38222| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_16378| Best HMM Match : DCX (HMM E-Value=0.7) 31 0.64
SB_6135| Best HMM Match : CSD (HMM E-Value=5.4) 31 0.64
SB_59249| Best HMM Match : zf-C2H2 (HMM E-Value=0.016) 31 0.84
SB_54320| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_52360| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051) 31 0.84
SB_50181| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051) 31 0.84
SB_49315| Best HMM Match : Calreticulin (HMM E-Value=0) 31 0.84
SB_42604| Best HMM Match : DUF1196 (HMM E-Value=5) 31 0.84
SB_31784| Best HMM Match : RVT_1 (HMM E-Value=2e-35) 31 0.84
SB_23032| Best HMM Match : RVT_1 (HMM E-Value=1.1e-23) 31 0.84
SB_14835| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051) 31 0.84
SB_14424| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051) 31 0.84
SB_10362| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_263| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051) 31 0.84
SB_58157| Best HMM Match : RVT_1 (HMM E-Value=1.6e-36) 31 0.84
SB_58057| Best HMM Match : RVT_1 (HMM E-Value=0.0085) 31 0.84
SB_57293| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_57033| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_47792| Best HMM Match : RNA_pol_Rpb7_N (HMM E-Value=5.6) 31 0.84
SB_47109| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_35729| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051) 31 0.84
SB_28415| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051) 31 0.84
SB_26934| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051) 31 0.84
SB_19613| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_19159| Best HMM Match : RVT_1 (HMM E-Value=0.00032) 31 0.84
SB_13171| Best HMM Match : AT_hook (HMM E-Value=6.4) 31 0.84
SB_9256| Best HMM Match : PsiB (HMM E-Value=4.9) 31 0.84
SB_6541| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_5461| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_2372| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051) 31 0.84
SB_10529| Best HMM Match : zf-C2H2 (HMM E-Value=0.0034) 30 1.1
SB_56454| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_48716| Best HMM Match : Galactosyl_T (HMM E-Value=1.2) 29 2.6
SB_26672| Best HMM Match : Exo_endo_phos (HMM E-Value=0.46) 29 2.6
SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_7378| Best HMM Match : SCP (HMM E-Value=3.3e-29) 29 3.4
SB_55891| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_54554| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 28 5.9
SB_52808| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 28 5.9
SB_47515| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 28 5.9
SB_41510| Best HMM Match : Minor_tail_Z (HMM E-Value=3.5) 28 5.9
SB_40055| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 28 5.9
SB_36229| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 28 5.9
SB_20592| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_18837| Best HMM Match : Extensin_2 (HMM E-Value=1.7) 28 5.9
SB_17452| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 28 5.9
SB_14108| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 28 5.9
SB_9519| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 28 5.9
SB_5126| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_3604| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_2129| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_54746| Best HMM Match : RVT_1 (HMM E-Value=8.4e-11) 28 5.9
SB_36062| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 28 5.9
SB_32612| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 28 5.9
SB_5327| Best HMM Match : zf-C2H2 (HMM E-Value=0.13) 28 5.9
SB_3857| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_18732| Best HMM Match : RVT_1 (HMM E-Value=2.2e-13) 27 7.9
>SB_56874| Best HMM Match : RVT_1 (HMM E-Value=4.5e-38)
Length = 492
Score = 36.7 bits (81), Expect = 0.013
Identities = 25/63 (39%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Frame = -1
Query: 177 WQWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL---VKFAGIRW---MRLA 16
W+W GH R+ T ++ L P+ KR GRP W DL K G W RLA
Sbjct: 412 WRWIGHTLRKPATNITRQSLTWNPQ-GKRKRGRPRNTWRRDLDADAKQMGKTWGQLERLA 470
Query: 15 QNR 7
QNR
Sbjct: 471 QNR 473
>SB_36818| Best HMM Match : RVT_1 (HMM E-Value=8e-35)
Length = 629
Score = 32.3 bits (70), Expect = 0.28
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDLVKFAGIRWMRL 19
+W+GH+ R ++R ++VL + R GRP R+ D+L + ++W L
Sbjct: 503 RWSGHVIRMEESRIPRQVLYSELASGYRKKGRPKKRYKDNLK--SNLKWTSL 552
>SB_10620| Best HMM Match : zf-C2H2 (HMM E-Value=0.012)
Length = 159
Score = 32.3 bits (70), Expect = 0.28
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDLVKFAGIRWMRL 19
+W+GH+ R ++R ++VL + R GRP R+ D+L + ++W L
Sbjct: 33 RWSGHVIRMEESRIPRQVLYSELASGYRKKGRPKKRYKDNLK--SNLKWTSL 82
>SB_50300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3669
Score = 32.3 bits (70), Expect = 0.28
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDLVKFAGIRWMRL 19
+W+GH+ R ++R ++VL + R GRP R+ D+L + ++W L
Sbjct: 3273 RWSGHVIRMEESRIPRQVLYSELASGYRKKGRPKKRYKDNLK--SNLKWTSL 3322
>SB_32967| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 31.1 bits (67), Expect = 0.64
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL---VKFAGI---RWMRLAQ 13
+WAGH+ R +DTR +++L RS G R+ D L K GI W LA
Sbjct: 295 RWAGHVRRMSDTRIPKQLLYGELHYGTRSKGGQKKRYKDTLKVSAKQFGIDPDNWEELAD 354
Query: 12 NRS 4
+R+
Sbjct: 355 DRT 357
>SB_49943| Best HMM Match : zf-nanos (HMM E-Value=9.2)
Length = 153
Score = 31.1 bits (67), Expect = 0.64
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL---VKFAGI---RWMRLAQ 13
+WAGH+ R +DTR +++L RS G R+ D L K GI W LA
Sbjct: 14 RWAGHVRRMSDTRIPKQLLYGELHYGTRSKGGQKKRYKDTLKVSAKQFGIDPDNWEELAD 73
Query: 12 NRS 4
+R+
Sbjct: 74 DRT 76
>SB_46439| Best HMM Match : RVT_1 (HMM E-Value=4.8e-25)
Length = 1641
Score = 31.1 bits (67), Expect = 0.64
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = -1
Query: 177 WQWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL---VKFAGIRWMRL 19
W+W GH + T ++ L P+ KR GRP W DL K G W +L
Sbjct: 527 WRWIGHTLPKPATNITRQSLTWNPK-GKRKRGRPRNTWRRDLDADAKHMGKTWGQL 581
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -1
Query: 177 WQWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL 52
W+W GH + T ++ L P+ KR GRP W DL
Sbjct: 167 WRWIGHTLPKPATNITRQSLTWNPK-GKRKRGRPRNTWRRDL 207
>SB_38222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 356
Score = 31.1 bits (67), Expect = 0.64
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL---VKFAGI---RWMRLAQ 13
+WAGH+ R +DTR +++L RS G R+ D L K GI W LA
Sbjct: 227 RWAGHVRRMSDTRIPKQLLYGELHYGTRSKGGQKKRYKDTLKVSAKQFGIDPDNWEELAD 286
Query: 12 NRS 4
+R+
Sbjct: 287 DRT 289
>SB_16378| Best HMM Match : DCX (HMM E-Value=0.7)
Length = 754
Score = 31.1 bits (67), Expect = 0.64
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL---VKFAGI---RWMRLAQ 13
+WAGH+ R +DTR +++L RS G R+ D L K GI W LA
Sbjct: 241 RWAGHVRRMSDTRIPKQLLYGELHYGTRSKGGQKKRYKDTLKVSAKQFGIDPDNWEELAD 300
Query: 12 NRS 4
+R+
Sbjct: 301 DRT 303
>SB_6135| Best HMM Match : CSD (HMM E-Value=5.4)
Length = 254
Score = 31.1 bits (67), Expect = 0.64
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL---VKFAGI---RWMRLAQ 13
+WAGH+ R +DTR +++L RS G R+ D L K GI W LA
Sbjct: 136 RWAGHVRRMSDTRIPKQLLYGELHYGTRSKGGQKKRYKDTLKVSAKQFGIDPDNWEELAD 195
Query: 12 NRS 4
+R+
Sbjct: 196 DRT 198
>SB_59249| Best HMM Match : zf-C2H2 (HMM E-Value=0.016)
Length = 236
Score = 30.7 bits (66), Expect = 0.84
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL---VKFAGI---RWMRLAQ 13
+WAGH+AR D R +++L + KR G R+ D L +K I W LAQ
Sbjct: 111 RWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLKLSLKAFNIDHTSWELLAQ 170
Query: 12 NR 7
NR
Sbjct: 171 NR 172
>SB_54320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 30.7 bits (66), Expect = 0.84
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL---VKFAGI---RWMRLAQ 13
+WAGH+AR D R +++L + KR G R+ D L +K I W LAQ
Sbjct: 121 RWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLKLSLKAFNIDHTSWELLAQ 180
Query: 12 NR 7
NR
Sbjct: 181 NR 182
>SB_52360| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051)
Length = 455
Score = 30.7 bits (66), Expect = 0.84
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL---VKFAGI---RWMRLAQ 13
+WAGH+AR D R +++L + KR G R+ D L +K I W LAQ
Sbjct: 330 RWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLKLSLKAFNIDHTSWELLAQ 389
Query: 12 NR 7
NR
Sbjct: 390 NR 391
>SB_50181| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051)
Length = 503
Score = 30.7 bits (66), Expect = 0.84
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL---VKFAGI---RWMRLAQ 13
+WAGH+AR D R +++L + KR G R+ D L +K I W LAQ
Sbjct: 378 RWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLKLSLKTFNIDHTSWELLAQ 437
Query: 12 NR 7
NR
Sbjct: 438 NR 439
>SB_49315| Best HMM Match : Calreticulin (HMM E-Value=0)
Length = 1086
Score = 30.7 bits (66), Expect = 0.84
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL---VKFAGI---RWMRLAQ 13
+WAGH+AR D R +++L + KR G R+ D L +K I W LAQ
Sbjct: 609 RWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLKLSLKAFNIDHTSWELLAQ 668
Query: 12 NR 7
NR
Sbjct: 669 NR 670
>SB_42604| Best HMM Match : DUF1196 (HMM E-Value=5)
Length = 294
Score = 30.7 bits (66), Expect = 0.84
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL---VKFAGI---RWMRLAQ 13
+WAGH+AR D R +++L + KR G R+ D L +K I W LAQ
Sbjct: 231 RWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLKLSLKAFNIDHTSWELLAQ 290
Query: 12 NR 7
NR
Sbjct: 291 NR 292
>SB_31784| Best HMM Match : RVT_1 (HMM E-Value=2e-35)
Length = 963
Score = 30.7 bits (66), Expect = 0.84
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDLVKFAGIRWMRL 19
+W+GH+ R ++R ++V + R GRP R+ D+L + ++W L
Sbjct: 837 RWSGHVIRMEESRIPRQVFYSELASGYRKKGRPKKRYKDNLK--SNLKWTSL 886
>SB_23032| Best HMM Match : RVT_1 (HMM E-Value=1.1e-23)
Length = 855
Score = 30.7 bits (66), Expect = 0.84
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL---VKFAGI---RWMRLAQ 13
+WAGH+AR D R +++L + KR G R+ D L +K I W LAQ
Sbjct: 730 RWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLKLSLKAFNIDHTSWELLAQ 789
Query: 12 NR 7
NR
Sbjct: 790 NR 791
>SB_14835| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051)
Length = 382
Score = 30.7 bits (66), Expect = 0.84
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL---VKFAGI---RWMRLAQ 13
+WAGH+AR D R +++L + KR G R+ D L +K I W LAQ
Sbjct: 257 RWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLKLSLKAFNIDHTSWELLAQ 316
Query: 12 NR 7
NR
Sbjct: 317 NR 318
>SB_14424| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051)
Length = 272
Score = 30.7 bits (66), Expect = 0.84
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL---VKFAGI---RWMRLAQ 13
+WAGH+AR D R +++L + KR G R+ D L +K I W LAQ
Sbjct: 147 RWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLKLSLKAFNIDHTSWELLAQ 206
Query: 12 NR 7
NR
Sbjct: 207 NR 208
>SB_10362| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 356
Score = 30.7 bits (66), Expect = 0.84
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL---VKFAGI---RWMRLAQ 13
+WAGH+AR D R +++L + KR G R+ D L +K I W LAQ
Sbjct: 231 RWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLKLSLKAFNIDHTSWELLAQ 290
Query: 12 NR 7
NR
Sbjct: 291 NR 292
>SB_263| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051)
Length = 272
Score = 30.7 bits (66), Expect = 0.84
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL---VKFAGI---RWMRLAQ 13
+WAGH+AR D R +++L + KR G R+ D L +K I W LAQ
Sbjct: 147 RWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLKLSLKAFNIDHTSWELLAQ 206
Query: 12 NR 7
NR
Sbjct: 207 NR 208
>SB_58157| Best HMM Match : RVT_1 (HMM E-Value=1.6e-36)
Length = 1092
Score = 30.7 bits (66), Expect = 0.84
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL---VKFAGI---RWMRLAQ 13
+WAGH+AR D R +++L + KR G R+ D L +K I W LAQ
Sbjct: 967 RWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLKLSLKAFNIDHTSWELLAQ 1026
Query: 12 NR 7
NR
Sbjct: 1027 NR 1028
>SB_58057| Best HMM Match : RVT_1 (HMM E-Value=0.0085)
Length = 576
Score = 30.7 bits (66), Expect = 0.84
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL---VKFAGI---RWMRLAQ 13
+WAGH+AR D R +++L + KR G R+ D L +K I W LAQ
Sbjct: 462 RWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLKLSLKAFNIDHTSWELLAQ 521
Query: 12 NR 7
NR
Sbjct: 522 NR 523
>SB_57293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1395
Score = 30.7 bits (66), Expect = 0.84
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL---VKFAGI---RWMRLAQ 13
+WAGH+AR D R +++L + KR G R+ D L +K I W LAQ
Sbjct: 1007 RWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLKLSLKAFNIDHTSWELLAQ 1066
Query: 12 NR 7
NR
Sbjct: 1067 NR 1068
>SB_57033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 30.7 bits (66), Expect = 0.84
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDLVKFAGIRWMRL 19
+W+GH+ R ++R ++V + R GRP R+ D+L + ++W L
Sbjct: 508 RWSGHVIRMEESRIPRQVFYSELASGYRKKGRPKKRYKDNLK--SNLKWKSL 557
>SB_47792| Best HMM Match : RNA_pol_Rpb7_N (HMM E-Value=5.6)
Length = 255
Score = 30.7 bits (66), Expect = 0.84
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDLVKFAGIRWMRLAQN 10
+W GH+ R R +++L T R+ GRP R+ D+VK ++W ++ N
Sbjct: 182 RWTGHVHRMDTDRLPRQLLYSQLTTGTRNQGRPRLRFK-DVVK-RNLKWRDISSN 234
>SB_47109| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 360
Score = 30.7 bits (66), Expect = 0.84
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL---VKFAGI---RWMRLAQ 13
+WAGH+AR D R +++L + KR G R+ D L +K I W LAQ
Sbjct: 235 RWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLKLSLKAFNIDHTSWELLAQ 294
Query: 12 NR 7
NR
Sbjct: 295 NR 296
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL 52
+WAGH+AR D R +++L + KR G R+ D L
Sbjct: 147 RWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTL 187
>SB_35729| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051)
Length = 237
Score = 30.7 bits (66), Expect = 0.84
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL---VKFAGI---RWMRLAQ 13
+WAGH+AR D R +++L + KR G R+ D L +K I W LAQ
Sbjct: 112 RWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLKLSLKAFNIDHTSWELLAQ 171
Query: 12 NR 7
NR
Sbjct: 172 NR 173
>SB_28415| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051)
Length = 356
Score = 30.7 bits (66), Expect = 0.84
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL---VKFAGI---RWMRLAQ 13
+WAGH+AR D R +++L + KR G R+ D L +K I W LAQ
Sbjct: 231 RWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLKLSLKAFNIDHTSWELLAQ 290
Query: 12 NR 7
NR
Sbjct: 291 NR 292
>SB_26934| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051)
Length = 1443
Score = 30.7 bits (66), Expect = 0.84
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL---VKFAGI---RWMRLAQ 13
+WAGH+AR D R +++L + KR G R+ D L +K I W LAQ
Sbjct: 1318 RWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLKLSLKAFNIDHTSWELLAQ 1377
Query: 12 NR 7
NR
Sbjct: 1378 NR 1379
>SB_19613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 30.7 bits (66), Expect = 0.84
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL---VKFAGI---RWMRLAQ 13
+WAGH+AR D R +++L + KR G R+ D L +K I W LAQ
Sbjct: 466 RWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLKLSLKAFNIDHTSWELLAQ 525
Query: 12 NR 7
NR
Sbjct: 526 NR 527
>SB_19159| Best HMM Match : RVT_1 (HMM E-Value=0.00032)
Length = 426
Score = 30.7 bits (66), Expect = 0.84
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDLVKFAGIRWMRLAQN 10
+W GH+ R R +++L T R+ GRP R+ D+VK ++W ++ N
Sbjct: 353 RWTGHVHRMDTDRLPRQLLYSQLTTGTRNQGRPRLRFK-DVVK-RNLKWRDISSN 405
>SB_13171| Best HMM Match : AT_hook (HMM E-Value=6.4)
Length = 188
Score = 30.7 bits (66), Expect = 0.84
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDLVKFAGIRWMRLAQN 10
+W GH+ R R +++L T R+ GRP R+ D+VK ++W ++ N
Sbjct: 115 RWTGHVHRMDTDRLPRQLLYSQLTTGTRNQGRPRLRFK-DVVK-RNLKWRDISSN 167
>SB_9256| Best HMM Match : PsiB (HMM E-Value=4.9)
Length = 259
Score = 30.7 bits (66), Expect = 0.84
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL---VKFAGI---RWMRLAQ 13
+WAGH+AR D R +++L + KR G R+ D L +K I W LAQ
Sbjct: 47 RWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLKLSLKAFNIDHTSWELLAQ 106
Query: 12 NR 7
NR
Sbjct: 107 NR 108
>SB_6541| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 801
Score = 30.7 bits (66), Expect = 0.84
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDLVKFAGIRWMRL 19
+W+GH+ R ++R ++V + R GRP R+ D+L + ++W L
Sbjct: 675 RWSGHVIRMEESRIPRQVFYRELASGYRKKGRPKKRYKDNLK--SNLKWTSL 724
>SB_5461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1766
Score = 30.7 bits (66), Expect = 0.84
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL---VKFAGI---RWMRLAQ 13
+WAGH+AR D R +++L + KR G R+ D L +K I W LAQ
Sbjct: 872 RWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLKLSLKAFNIDHTSWELLAQ 931
Query: 12 NR 7
NR
Sbjct: 932 NR 933
>SB_2372| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051)
Length = 414
Score = 30.7 bits (66), Expect = 0.84
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL---VKFAGI---RWMRLAQ 13
+WAGH+AR D R +++L + KR G R+ D L +K I W LAQ
Sbjct: 289 RWAGHVARMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLKLSLKAFNIDHTSWELLAQ 348
Query: 12 NR 7
NR
Sbjct: 349 NR 350
>SB_10529| Best HMM Match : zf-C2H2 (HMM E-Value=0.0034)
Length = 272
Score = 30.3 bits (65), Expect = 1.1
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL---VKFAGI---RWMRLAQ 13
+WAGH+AR D R +++L + KR G R+ D L +K I W LAQ
Sbjct: 147 RWAGHVARMPDERIPKKLLFGELQHGKRCKGGQKKRFKDTLKLSLKAFNIDHTSWELLAQ 206
Query: 12 NR 7
NR
Sbjct: 207 NR 208
>SB_56454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 534
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL 52
+WAGH+ R +DTR +++L RS G R+ D L
Sbjct: 446 RWAGHVRRMSDTRIPKQLLYGELHYGTRSKGGQKKRYKDTL 486
>SB_48716| Best HMM Match : Galactosyl_T (HMM E-Value=1.2)
Length = 323
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -2
Query: 188 PNLSGNGLGTLLVEPIPDGAKRFSNSCRVPENAAWVGPPQGGPMT 54
P ++G +L+ IP +R R+ WVG GGPMT
Sbjct: 66 PRITGKVFLIILINTIPKNVER-----RMTLRKTWVGTANGGPMT 105
>SB_26672| Best HMM Match : Exo_endo_phos (HMM E-Value=0.46)
Length = 1232
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 13 LRQPHPADSRELHQVIGPPCGGPTHAAFSGTRQLFENLLAPSGI 144
+R+ H + R LHQ PC G A SG R L + SG+
Sbjct: 729 VRKAHSSGKRPLHQR-KTPCSGVRKAHSSGKRSLHQRKTPSSGV 771
>SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
Frame = +1
Query: 37 SRELHQVIGPPCGGPTHAAFSGT-------RQLFENLLAPSGIGSTSNV 162
S + V+G PC G T + F G ++ +P+G+GSTS+V
Sbjct: 195 SSRVPMVVGEPCSGRTTSGFDGAWTVERCWTYTRQSPTSPTGVGSTSDV 243
>SB_7378| Best HMM Match : SCP (HMM E-Value=3.3e-29)
Length = 264
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 78 PPTRWSDDLVKFAGIRWMRLAQNRSL 1
PP +WSD+L + A +LAQ RS+
Sbjct: 136 PPLKWSDELAREAQYYAEKLAQQRSM 161
>SB_55891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 51
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/38 (31%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = -2
Query: 545 RRTTYCDIILHVKGIILVNPI--HSI*HTQNISKPMHC 438
RR++ I+L ++G +L+ H+I H ++++P HC
Sbjct: 14 RRSSVTIIVLRIRGRLLIECTCRHTIFHVLSLTRPDHC 51
>SB_54554| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 137
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSD 58
+WAGH+ R +D+R +++L R VG R+ D
Sbjct: 7 RWAGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKD 45
>SB_52808| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 166
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSD 58
+WAGH+ R +D+R +++L R VG R+ D
Sbjct: 36 RWAGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKD 74
>SB_47515| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 189
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSD 58
+WAGH+ R +D+R +++L R VG R+ D
Sbjct: 59 RWAGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKD 97
>SB_41510| Best HMM Match : Minor_tail_Z (HMM E-Value=3.5)
Length = 208
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSD 58
+WAGH+ R +D+R +++L R VG R+ D
Sbjct: 147 RWAGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKD 185
>SB_40055| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 303
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSD 58
+WAGH+ R +D+R +++L R VG R+ D
Sbjct: 173 RWAGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKD 211
>SB_36229| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 269
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSD 58
+WAGH+ R +D+R +++L R VG R+ D
Sbjct: 139 RWAGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKD 177
>SB_20592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSD 58
+WAGH+ R +D+R +++L R VG R+ D
Sbjct: 7 RWAGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKD 45
>SB_18837| Best HMM Match : Extensin_2 (HMM E-Value=1.7)
Length = 626
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = -2
Query: 200 PKNCPNLSGNGLGTLLVEPIPDGAKRFSNSCRVPENAAWVGPPQGGP 60
P + P GNG+ LL +P+ G + S R W P GP
Sbjct: 383 PPSGPCHRGNGIQNLLQDPV-TGGMVYRTSFRTLSPGEWYTEPPSGP 428
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = -2
Query: 200 PKNCPNLSGNGLGTLLVEPIPDGAKRFSNSCRVPENAAWVGPPQGGP 60
P + P GNG+ LL +P+ G +S R W P GP
Sbjct: 301 PPSRPCHRGNGIQNLLQDPVTGGMVN-KSSFRTLSPGEWYTEPPSGP 346
>SB_17452| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 189
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSD 58
+WAGH+ R +D+R +++L R VG R+ D
Sbjct: 59 RWAGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKD 97
>SB_14108| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 404
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSD 58
+WAGH+ R +D+R +++L R VG R+ D
Sbjct: 274 RWAGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKD 312
>SB_9519| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 299
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSD 58
+WAGH+ R +D+R +++L R VG R+ D
Sbjct: 169 RWAGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKD 207
>SB_5126| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSD 58
+WAGH+ R +D+R +++L R VG R+ D
Sbjct: 228 RWAGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKD 266
>SB_3604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1319
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSD 58
+WAGH+ R +D+R +++L R VG R+ D
Sbjct: 1189 RWAGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKD 1227
>SB_2129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSD 58
+WAGH+ R +D+R +++L R VG R+ D
Sbjct: 36 RWAGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKD 74
>SB_54746| Best HMM Match : RVT_1 (HMM E-Value=8.4e-11)
Length = 959
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSD 58
+WAGH+ R +D+R +++L R VG R+ D
Sbjct: 893 RWAGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKD 931
>SB_36062| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 166
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSD 58
+WAGH+ R +D+R +++L R VG R+ D
Sbjct: 36 RWAGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKD 74
>SB_32612| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 166
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSD 58
+WAGH+ R +D+R +++L R VG R+ D
Sbjct: 36 RWAGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKD 74
>SB_5327| Best HMM Match : zf-C2H2 (HMM E-Value=0.13)
Length = 328
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSD 58
+WAGH+ R +D+R +++L R VG R+ D
Sbjct: 198 RWAGHVCRMSDSRIPKQLLYGELSRGSRKVGGQRKRYKD 236
>SB_3857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 7.9
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSDDL---VKFAGI---RWMRLAQ 13
+WAGH+A D R +++L + KR G R+ D L +K I W LAQ
Sbjct: 47 RWAGHVACMPDERLPKKLLFGELQHGKRCKGGQKKRFKDTLKLSLKAFNIDHTSWELLAQ 106
Query: 12 NR 7
NR
Sbjct: 107 NR 108
>SB_18732| Best HMM Match : RVT_1 (HMM E-Value=2.2e-13)
Length = 1582
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -1
Query: 174 QWAGHIARRTDTRWGQEVLE*LPRTRKRSVGRPPTRWSD 58
+W GH+ R R +++L T R+ GRP R+ D
Sbjct: 1543 RWTGHVHRMDTDRLPRQLLYSQLTTGTRNQGRPRLRFKD 1581
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,067,495
Number of Sequences: 59808
Number of extensions: 426800
Number of successful extensions: 1198
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 1119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1197
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1300738331
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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