Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_D01
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin pro... 126 1e-29
AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin (... 126 1e-29
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 43 2e-04
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 43 2e-04
AF106582-7|ABD94096.1| 806|Caenorhabditis elegans Hypothetical ... 33 0.23
AF106582-6|ABD94095.1| 834|Caenorhabditis elegans Hypothetical ... 33 0.23
U55364-2|AAN84822.2| 317|Caenorhabditis elegans Hypothetical pr... 31 0.94
U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical p... 30 1.6
Z81131-1|CAB03423.4| 464|Caenorhabditis elegans Hypothetical pr... 29 2.9
U37430-4|AAB52675.1| 1616|Caenorhabditis elegans Vitellogenin st... 29 2.9
Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 29 3.8
U88315-17|AAK68238.1| 132|Caenorhabditis elegans Hypothetical p... 29 3.8
U88315-16|AAK68237.1| 414|Caenorhabditis elegans Hypothetical p... 29 3.8
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 29 3.8
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 29 3.8
Z92831-4|CAJ58497.1| 447|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 28 6.7
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 28 6.7
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical pr... 28 6.7
U53338-5|AAA96193.1| 463|Caenorhabditis elegans Hypothetical pr... 27 8.8
AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric c... 27 8.8
AF016687-11|ABL01528.1| 646|Caenorhabditis elegans Hypothetical... 27 8.8
>L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin
protein.
Length = 264
Score = 126 bits (304), Expect = 1e-29
Identities = 53/120 (44%), Positives = 76/120 (63%), Gaps = 1/120 (0%)
Frame = +2
Query: 248 DPCMKVHCSAGRVCEINEHGEAICNCIKECP-YETDSRRKVCTNFNETWSSDCEVYRQRC 424
+PC C G+ C + + GE C CI +CP + D KVC N N+T++S C++YR+RC
Sbjct: 51 NPCEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSLCDLYRERC 110
Query: 425 LCLDHSELCRGAQYHHVQIEYYGTCREMPECSENEMSDFPRRMRDWLFNIMRDLAERREL 604
LC S+ C A V +EY G C+++ EC+E M+ FP RM DWLF +M++L +RREL
Sbjct: 111 LCKRKSKECSKAFNAKVHLEYLGECKKLDECTEEHMAQFPERMADWLFQVMKELKKRREL 170
>AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin
(sparc) related protein1 protein.
Length = 264
Score = 126 bits (304), Expect = 1e-29
Identities = 53/120 (44%), Positives = 76/120 (63%), Gaps = 1/120 (0%)
Frame = +2
Query: 248 DPCMKVHCSAGRVCEINEHGEAICNCIKECP-YETDSRRKVCTNFNETWSSDCEVYRQRC 424
+PC C G+ C + + GE C CI +CP + D KVC N N+T++S C++YR+RC
Sbjct: 51 NPCEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSLCDLYRERC 110
Query: 425 LCLDHSELCRGAQYHHVQIEYYGTCREMPECSENEMSDFPRRMRDWLFNIMRDLAERREL 604
LC S+ C A V +EY G C+++ EC+E M+ FP RM DWLF +M++L +RREL
Sbjct: 111 LCKRKSKECSKAFNAKVHLEYLGECKKLDECTEEHMAQFPERMADWLFQVMKELKKRREL 170
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 260 KVHCSAGRVCEINEHGEAICNCIKECP-YETDSRRKVCTNFNETWSSDCEVYRQRC 424
K C C + E+ +A C C +CP YE + ++VC T+SS+C + + C
Sbjct: 515 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSAC 570
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +2
Query: 251 PCMKVHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNETWSSDCEVYRQRC 424
PC K+ C C + A C C C D R VC ET+ ++CE+ ++ C
Sbjct: 369 PCEKMECGFWGSCVVKPDRTAECECPNRCE---DVMRPVCATNGETFDNECEMKKKSC 423
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Frame = +2
Query: 269 CSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNETWSSDCEVYRQRCLC-----L 433
C +VC + + G+ C CP TD ++VC + +T+S++C + C+ +
Sbjct: 448 CKKPQVCVVVD-GKPKC----VCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFV 502
Query: 434 DHSELCRGAQYHHVQIEYYGTC 499
++ C + + ++Y C
Sbjct: 503 KYNSACEACKLKKEKCDFYSAC 524
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +2
Query: 248 DPCMKVHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNETWSSDCEVYRQRC 424
DPC C G+ C++ C C ++C T + VC +T+ ++C + C
Sbjct: 294 DPCHGHKCPNGQTCQLGVDRRPECKCSEQC---TMNSAHVCGTDGKTYLNECFLKLAAC 349
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/59 (23%), Positives = 20/59 (33%)
Frame = +2
Query: 248 DPCMKVHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNETWSSDCEVYRQRC 424
D C+ V C G C +C C CP ++C + S C + C
Sbjct: 585 DECLHVQCRYGEECR-----SGVCVCSYNCPANPPLSARICGENGVLYPSLCHLQLASC 638
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 260 KVHCSAGRVCEINEHGEAICNCIKECP-YETDSRRKVCTNFNETWSSDCEVYRQRC 424
K C C + E+ +A C C +CP YE + ++VC T+SS+C + + C
Sbjct: 523 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSAC 578
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +2
Query: 251 PCMKVHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNETWSSDCEVYRQRC 424
PC K+ C C + A C C C D R VC ET+ ++CE+ ++ C
Sbjct: 377 PCEKMECGFWGSCVVKPDRTAECECPNRCE---DVMRPVCATNGETFDNECEMKKKSC 431
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Frame = +2
Query: 269 CSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNETWSSDCEVYRQRCLC-----L 433
C +VC + + G+ C CP TD ++VC + +T+S++C + C+ +
Sbjct: 456 CKKPQVCVVVD-GKPKC----VCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFV 510
Query: 434 DHSELCRGAQYHHVQIEYYGTC 499
++ C + + ++Y C
Sbjct: 511 KYNSACEACKLKKEKCDFYSAC 532
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +2
Query: 248 DPCMKVHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNETWSSDCEVYRQRC 424
DPC C G+ C++ C C ++C T + VC +T+ ++C + C
Sbjct: 302 DPCHGHKCPNGQTCQLGVDRRPECKCSEQC---TMNSAHVCGTDGKTYLNECFLKLAAC 357
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/59 (23%), Positives = 20/59 (33%)
Frame = +2
Query: 248 DPCMKVHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNETWSSDCEVYRQRC 424
D C+ V C G C +C C CP ++C + S C + C
Sbjct: 593 DECLHVQCRYGEECR-----SGVCVCSYNCPANPPLSARICGENGVLYPSLCHLQLASC 646
>AF106582-7|ABD94096.1| 806|Caenorhabditis elegans Hypothetical
protein W05F2.4b protein.
Length = 806
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 267 TAAPAVSVRSTSTGKLSATASRSVHTKPTLGARCAQTS 380
T APA + S S K A++S ++ KPT+ + ++TS
Sbjct: 96 TTAPAAKIASASDSKKPASSSSTISVKPTVRQKTSETS 133
>AF106582-6|ABD94095.1| 834|Caenorhabditis elegans Hypothetical
protein W05F2.4a protein.
Length = 834
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 267 TAAPAVSVRSTSTGKLSATASRSVHTKPTLGARCAQTS 380
T APA + S S K A++S ++ KPT+ + ++TS
Sbjct: 124 TTAPAAKIASASDSKKPASSSSTISVKPTVRQKTSETS 161
>U55364-2|AAN84822.2| 317|Caenorhabditis elegans Hypothetical
protein F21C10.9 protein.
Length = 317
Score = 30.7 bits (66), Expect = 0.94
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 325 HQGVSIRNRL*AQGVHKLQRDLVIGLRGVPTALP 426
++G I + + AQ + ++++DLV+GLRGV P
Sbjct: 85 YRGKGIGSMIWAQAMSRIRKDLVLGLRGVVKMAP 118
>U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical
protein B0507.1 protein.
Length = 615
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/46 (26%), Positives = 15/46 (32%)
Frame = +2
Query: 269 CSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNETWSSDCE 406
CS G C G +C C + Y S K C C+
Sbjct: 215 CSGGAACICGARGNCMCECATDFGYTLASDGKTCQRVRRRLKEKCK 260
>Z81131-1|CAB03423.4| 464|Caenorhabditis elegans Hypothetical
protein T24D1.2 protein.
Length = 464
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/61 (36%), Positives = 29/61 (47%)
Frame = -1
Query: 563 ASRACAAGSLTFRSRCTPAFPCKSRSTRSARGGTAPRGTAPSGRGRGSAVGTPRSPMTRS 384
A+R A+ R R T S+ S+ G RGT + RGRGSA G + M R+
Sbjct: 54 AARERASPYSRSRIRSTAGTSDAGPSSSSSVRGRGTRGTTSARRGRGSARG-GEATMNRT 112
Query: 383 R 381
R
Sbjct: 113 R 113
>U37430-4|AAB52675.1| 1616|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 1 protein.
Length = 1616
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 462 CAPRHSSEWSRQRQRCRYTSQSDDQVSLKFVHTLRL 355
C PRHSSE R + R + D + FVH++++
Sbjct: 1574 CLPRHSSEARRLVKEARQGTVQLDDHKISFVHSVQV 1609
>Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +2
Query: 269 CSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNET--WSSDCEVYRQRC---LCL 433
C G E + HG + C K CP T+ +C + ++T S+C + +C C+
Sbjct: 385 CQDGSEPEFSLHGSSYCWSNKVCPAMTECVAGLCCSISKTRKRQSECLEGQFKCGTGQCI 444
Query: 434 DHSELC 451
+ S C
Sbjct: 445 EESLKC 450
>Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +2
Query: 269 CSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNET--WSSDCEVYRQRC---LCL 433
C G E + HG + C K CP T+ +C + ++T S+C + +C C+
Sbjct: 385 CQDGSEPEFSLHGSSYCWSNKVCPAMTECVAGLCCSISKTRKRQSECLEGQFKCGTGQCI 444
Query: 434 DHSELC 451
+ S C
Sbjct: 445 EESLKC 450
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = +2
Query: 254 CMKVHCSAGRVCEIN-EHGEAICNCIKECPYETDSRRKVCTNFNE-TWSSDCEVYR--QR 421
C C+A + + G+ +CN I ECP + + C E T+S D +
Sbjct: 1224 CEPCGCNAAGTDPLQCKDGQCLCNEIGECPCKKNVHGTKCDQCGEGTFSLDSSNLKGCTE 1283
Query: 422 CLCLDHSELC 451
C C + + C
Sbjct: 1284 CFCFNRTSNC 1293
>U88315-17|AAK68238.1| 132|Caenorhabditis elegans Hypothetical
protein C37H5.13b protein.
Length = 132
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = -3
Query: 417 CRYTSQSDDQVSLKFVHTLRLESVSYGHSLMQLQIASPCSLISQTRPALQCTFMHGSSRL 238
CR + +F+ RLES++ G+ + +SP S + T P +Q F H +
Sbjct: 5 CRTARHFVKSTARRFIEQKRLESLTTGNGM-----SSPSSTHANTAPVVQSHFAHRPQHV 59
Query: 237 ISLSGASRD 211
S S +
Sbjct: 60 SSAPSRSME 68
>U88315-16|AAK68237.1| 414|Caenorhabditis elegans Hypothetical
protein C37H5.13a protein.
Length = 414
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = -3
Query: 417 CRYTSQSDDQVSLKFVHTLRLESVSYGHSLMQLQIASPCSLISQTRPALQCTFMHGSSRL 238
CR + +F+ RLES++ G+ + +SP S + T P +Q F H +
Sbjct: 5 CRTARHFVKSTARRFIEQKRLESLTTGNGM-----SSPSSTHANTAPVVQSHFAHRPQHV 59
Query: 237 ISLSGASRD 211
S S +
Sbjct: 60 SSAPSRSME 68
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = +2
Query: 254 CMKVHCSAGRVCEIN-EHGEAICNCIKECPYETDSRRKVCTNFNE-TWSSDCEVYR--QR 421
C C+A + + G+ +CN I ECP + + C E T+S D +
Sbjct: 1224 CEPCGCNAAGTDPLQCKDGQCLCNEIGECPCKKNVHGTKCDQCGEGTFSLDSSNLKGCTE 1283
Query: 422 CLCLDHSELC 451
C C + + C
Sbjct: 1284 CFCFNRTSNC 1293
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = +2
Query: 254 CMKVHCSAGRVCEIN-EHGEAICNCIKECPYETDSRRKVCTNFNE-TWSSDCEVYR--QR 421
C C+A + + G+ +CN I ECP + + C E T+S D +
Sbjct: 1224 CEPCGCNAAGTDPLQCKDGQCLCNEIGECPCKKNVHGTKCDQCGEGTFSLDSSNLKGCTE 1283
Query: 422 CLCLDHSELC 451
C C + + C
Sbjct: 1284 CFCFNRTSNC 1293
>Z92831-4|CAJ58497.1| 447|Caenorhabditis elegans Hypothetical
protein F22G12.7 protein.
Length = 447
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +2
Query: 116 ESEHLENGMAESLDERRFQEAERARVSEILNESRDAPDNEINLDDPCMKVHCS 274
E EHLEN + +S + R ++E A +SE+ + + + + +++ CS
Sbjct: 48 EKEHLENSIKKSKNMR--NQSEEAYLSELKRQGLEKHAANVKHQETMLRMSCS 98
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 267 TAAPAVSVRSTSTGKLSATASRSVHTKPTLGARCAQTST 383
T A A + +TS G S+ ASR +T+P + +++ T
Sbjct: 350 TGASASATSATSGGSASSDASRDKYTRPPIVLEASRSQT 388
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 267 TAAPAVSVRSTSTGKLSATASRSVHTKPTLGARCAQTST 383
T A A + +TS G S+ ASR +T+P + +++ T
Sbjct: 350 TGASASATSATSGGSASSDASRDKYTRPPIVLEASRSQT 388
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 267 TAAPAVSVRSTSTGKLSATASRSVHTKPTLGARCAQTST 383
T A A + +TS G S+ ASR +T+P + +++ T
Sbjct: 350 TGASASATSATSGGSASSDASRDKYTRPPIVLEASRSQT 388
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 267 TAAPAVSVRSTSTGKLSATASRSVHTKPTLGARCAQTST 383
T A A + +TS G S+ ASR +T+P + +++ T
Sbjct: 350 TGASASATSATSGGSASSDASRDKYTRPPIVLEASRSQT 388
>Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical
protein K08E4.1 protein.
Length = 1208
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = -1
Query: 515 TPAFPCKSRSTRSARGGTAPRGTAPSGRGRGSAVGTPRSPMTR 387
TP P S+R + GG PR G GRG GT R
Sbjct: 686 TPRSPQDGMSSRGSSGGQTPR--QGGGGGRGGHFGTANQQKVR 726
>Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical
protein K08E4.1 protein.
Length = 1208
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = -1
Query: 515 TPAFPCKSRSTRSARGGTAPRGTAPSGRGRGSAVGTPRSPMTR 387
TP P S+R + GG PR G GRG GT R
Sbjct: 686 TPRSPQDGMSSRGSSGGQTPR--QGGGGGRGGHFGTANQQKVR 726
>U53338-5|AAA96193.1| 463|Caenorhabditis elegans Hypothetical
protein C05E11.7 protein.
Length = 463
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +2
Query: 257 MKVHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNETWSSDCEVYRQRCLCLD 436
+ + S G + NE+G+ + +C KEC +SR +C TW S+ + C D
Sbjct: 119 LSLPASTGCQLDDNEYGKQVISCKKEC----NSRGLIC--MMRTWISE----QNTCTMKD 168
Query: 437 HSELCRGAQ 463
+ C GA+
Sbjct: 169 IDQKC-GAE 176
>AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 1 protein.
Length = 1475
Score = 27.5 bits (58), Expect = 8.8
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Frame = +2
Query: 107 DISESEHLENGMAESLDERRFQEAERARVSEI---LNESRDAPDNEI-NLDDPCMKVHCS 274
+I +E NG+ +++ RF+ +RV E+ L E R EI +L++
Sbjct: 472 NIKNAEEKVNGLEAEVEKLRFEATNNSRVVELEQQLEEFRSLMIKEISDLENQLEAAKLE 531
Query: 275 AGRVCEINEHGEAICNCIKECPYE 346
+G E N EA I+E E
Sbjct: 532 SGSTSEPNAQLEASQATIQELTSE 555
>AF016687-11|ABL01528.1| 646|Caenorhabditis elegans Hypothetical
protein T21D12.7 protein.
Length = 646
Score = 27.5 bits (58), Expect = 8.8
Identities = 23/90 (25%), Positives = 31/90 (34%), Gaps = 6/90 (6%)
Frame = +2
Query: 275 AGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNETWSSDCE---VYRQRCLCLDHSE 445
+ R+C+ + H C Y DS K C F T E + C+ SE
Sbjct: 118 SNRICQASVHPGTPCGVPPATRYYFDSSSKTCRPFAFTGCGGNENNFKGKGECMMFCSSE 177
Query: 446 -LCRGAQYH--HVQIEYYGTCREMPECSEN 526
+C + H I TC E C N
Sbjct: 178 IICPRGEPHADRYSINNIATCMEDKHCPRN 207
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,872,180
Number of Sequences: 27780
Number of extensions: 317041
Number of successful extensions: 1525
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1514
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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