Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_C24
         (558 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    24   1.0  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    24   1.0  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   3.1  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   3.1  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           22   4.1  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   5.4  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   5.4  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   7.2  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   7.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   9.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.5  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   9.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.5  

>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -2

Query: 149 HNQAMATECPGAALFTYLSTWKHFH 75
           H+ + A+  P A ++ Y+S   H H
Sbjct: 47  HSSSSASTSPAARMYPYVSAAHHHH 71


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -2

Query: 149 HNQAMATECPGAALFTYLSTWKHFH 75
           H+ + A+  P A ++ Y+S   H H
Sbjct: 47  HSSSSASTSPAARMYPYVSAAHHHH 71


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 325 PRPSYASPSLPTQKLYPMSPQF 390
           P PS    SLPTQ+    +P +
Sbjct: 75  PSPSSTPSSLPTQRTSTSNPTY 96


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -2

Query: 464 IPTACYTTDQCIQDMQSMQNFHNSINWGDIGYNFCVGSDGL 342
           I T  Y T Q + +++ +   +NSI+  D      VGS G+
Sbjct: 152 IATIAYETFQNLPELEDLDLAYNSISSLDFNIFDQVGSLGM 192


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 286 LLAFPACIPTTFQPRPSYASPS 351
           LL  P C   +  P PS++S S
Sbjct: 190 LLPTPTCSEASSSPTPSHSSES 211


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 331 PSYASPSLPTQKLYP 375
           P+Y + S PT KL P
Sbjct: 38  PTYGTTSHPTSKLVP 52


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 331 PSYASPSLPTQKLYP 375
           P+Y + S PT KL P
Sbjct: 38  PTYGTTSHPTSKLVP 52


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 482 SRMALVCLGIWYLLAVLLPNIHA 550
           +R +L+CL  W++ A+    I A
Sbjct: 185 TRASLICLLAWFIAALFTSPILA 207


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -3

Query: 139 PWQLNVREQHCLRTFLPGNIFILD 68
           PW  NV      +  L  N+F+LD
Sbjct: 101 PWLQNVEPNLRPKLLLKHNLFLLD 124


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +2

Query: 482 SRMALVCLGIWYLLAV 529
           +R +L+CL  W++ A+
Sbjct: 185 TRASLICLLAWFIAAL 200


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 325 PRPSYASPSLPTQKLYPMSP 384
           P  S  + S  T  +YP+SP
Sbjct: 179 PEMSQVAASWHTPSMYPLSP 198


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 325 PRPSYASPSLPTQKLYPMSP 384
           P  S  + S  T  +YP+SP
Sbjct: 71  PEMSQVAASWHTPSMYPLSP 90


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 404 SFAYSACPECIGRWYNRQ 457
           S A++ CPE    +YN++
Sbjct: 600 SDAFTHCPEGFNEFYNQR 617


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 404 SFAYSACPECIGRWYNRQ 457
           S A++ CPE    +YN++
Sbjct: 833 SDAFTHCPEGFNEFYNQR 850


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 404 SFAYSACPECIGRWYNRQ 457
           S A++ CPE    +YN++
Sbjct: 833 SDAFTHCPEGFNEFYNQR 850


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,279
Number of Sequences: 336
Number of extensions: 3641
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)