Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_C24
         (558 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   2.1  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   3.7  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   4.8  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    22   4.8  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   8.4  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    21   8.4  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   8.4  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   8.4  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   8.4  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
 Frame = +2

Query: 296 SQHVYQQPSSL-----DLRMPVHRCQHRNCIQCRPS 388
           ++H+++  SS      DL  P+   QH NC+   PS
Sbjct: 270 ARHLFRTASSTPEDLQDLEEPLTTIQHNNCLTRIPS 305


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 271 IPTLWLLAFPACIP 312
           + T+W+L+F  C P
Sbjct: 186 VATVWILSFVICFP 199


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +2

Query: 284 GCWRSQHVYQ 313
           GCW S+H ++
Sbjct: 331 GCWNSEHFFE 340


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 412 ILCMS*MHWSV 444
           ILCMS +HW +
Sbjct: 295 ILCMSDLHWQL 305


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 244 SSRQSPIKQIPTLWLLAFPACIP 312
           S  + PI+ I   WL+A  + IP
Sbjct: 153 SGLKRPIRFILAAWLIALISAIP 175


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 408 LHTLHVLNALVGGITGS 458
           +H LH +  ++GGI G+
Sbjct: 331 VHNLHGMPGILGGIFGA 347


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 269 CLIGDWRDDLPPEKQLSTTKS 207
           CL+G W  D    ++L  T S
Sbjct: 196 CLVGTWSPDPAINRRLKETYS 216


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 269 CLIGDWRDDLPPEKQLSTTKS 207
           CL+G W  D    ++L  T S
Sbjct: 196 CLVGTWSPDPAINRRLKETYS 216


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 269 CLIGDWRDDLPPEKQLSTTKS 207
           CL+G W  D    ++L  T S
Sbjct: 196 CLVGTWSPDPAINRRLKETYS 216


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,470
Number of Sequences: 438
Number of extensions: 3808
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16072521
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)