BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I09A02NGRL0002_C23 (575 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AM292354-1|CAL23166.1| 321|Tribolium castaneum gustatory recept... 23 1.9 AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 22 4.3 AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 22 4.3 EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 7.5 EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 7.5 EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 7.5 EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 7.5 EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 7.5 AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esteras... 21 9.9 AJ829922-1|CAH25640.1| 193|Tribolium castaneum twist bHLH trans... 21 9.9 >AM292354-1|CAL23166.1| 321|Tribolium castaneum gustatory receptor candidate 33 protein. Length = 321 Score = 23.0 bits (47), Expect = 1.9 Identities = 7/22 (31%), Positives = 14/22 (63%) Frame = -1 Query: 506 YLVNVFYIITMIYG*RYKEKAY 441 +++NV Y++T+ Y Y + Y Sbjct: 105 FVINVLYVLTLCYAVYYWRQQY 126 >AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. Length = 712 Score = 21.8 bits (44), Expect = 4.3 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = -3 Query: 84 TSNRQFISNSRNMSVCEGSSVAVDI 10 T+NR S + VCEG V +D+ Sbjct: 166 TANRMIPGPS--IQVCEGDKVVIDV 188 >AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. Length = 717 Score = 21.8 bits (44), Expect = 4.3 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = -3 Query: 84 TSNRQFISNSRNMSVCEGSSVAVDI 10 T+NR S + VCEG V +D+ Sbjct: 166 TANRMIPGPS--IQVCEGDKVVIDV 188 >EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetylcholine receptor subunitalpha 6 transcript variant 5 protein. Length = 311 Score = 21.0 bits (42), Expect = 7.5 Identities = 10/28 (35%), Positives = 13/28 (46%) Frame = +2 Query: 149 CPPFPIYHQPTLLVVVSNICSRTRSVHQ 232 C F + L VVV N RT +H+ Sbjct: 280 CIMFMVASSVVLTVVVLNYHHRTADIHE 307 >EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetylcholine receptor subunitalpha 6 transcript variant 4 protein. Length = 311 Score = 21.0 bits (42), Expect = 7.5 Identities = 10/28 (35%), Positives = 13/28 (46%) Frame = +2 Query: 149 CPPFPIYHQPTLLVVVSNICSRTRSVHQ 232 C F + L VVV N RT +H+ Sbjct: 280 CIMFMVASSVVLTVVVLNYHHRTADIHE 307 >EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetylcholine receptor subunitalpha 6 transcript variant 3 protein. Length = 311 Score = 21.0 bits (42), Expect = 7.5 Identities = 10/28 (35%), Positives = 13/28 (46%) Frame = +2 Query: 149 CPPFPIYHQPTLLVVVSNICSRTRSVHQ 232 C F + L VVV N RT +H+ Sbjct: 280 CIMFMVASSVVLTVVVLNYHHRTADIHE 307 >EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetylcholine receptor subunitalpha 6 transcript variant 2 protein. Length = 311 Score = 21.0 bits (42), Expect = 7.5 Identities = 10/28 (35%), Positives = 13/28 (46%) Frame = +2 Query: 149 CPPFPIYHQPTLLVVVSNICSRTRSVHQ 232 C F + L VVV N RT +H+ Sbjct: 280 CIMFMVASSVVLTVVVLNYHHRTADIHE 307 >EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetylcholine receptor subunitalpha 6 transcript variant 1 protein. Length = 311 Score = 21.0 bits (42), Expect = 7.5 Identities = 10/28 (35%), Positives = 13/28 (46%) Frame = +2 Query: 149 CPPFPIYHQPTLLVVVSNICSRTRSVHQ 232 C F + L VVV N RT +H+ Sbjct: 280 CIMFMVASSVVLTVVVLNYHHRTADIHE 307 >AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esterase protein. Length = 509 Score = 20.6 bits (41), Expect = 9.9 Identities = 7/15 (46%), Positives = 10/15 (66%) Frame = +1 Query: 343 KFDTPFMKSSWEPST 387 K TPF+ +W+P T Sbjct: 479 KEKTPFINVTWKPVT 493 >AJ829922-1|CAH25640.1| 193|Tribolium castaneum twist bHLH transcription factor protein. Length = 193 Score = 20.6 bits (41), Expect = 9.9 Identities = 8/24 (33%), Positives = 11/24 (45%) Frame = +2 Query: 104 TTTMIYPRRRSRPEICPPFPIYHQ 175 +T P E+ PPF YH+ Sbjct: 6 STEKFLPTVLPHQEVPPPFGYYHE 29 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 134,925 Number of Sequences: 336 Number of extensions: 3004 Number of successful extensions: 10 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10 length of database: 122,585 effective HSP length: 54 effective length of database: 104,441 effective search space used: 14308417 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -