Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_C23
(575 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC017020-1|AAH17020.1| 361|Homo sapiens single-stranded DNA bin... 30 5.1
AY026275-1|AAK15803.1| 361|Homo sapiens single stranded DNA bin... 30 5.1
AK126437-1|BAC86549.1| 229|Homo sapiens protein ( Homo sapiens ... 30 6.7
AK074537-1|BAC11046.1| 361|Homo sapiens protein ( Homo sapiens ... 30 6.7
BX255973-1|CAH73104.1| 335|Homo sapiens RP11-375E1__A.3 protein. 29 8.9
BX255972-1|CAH73099.1| 335|Homo sapiens RP11-375E1__A.3 protein. 29 8.9
BX255971-1|CAI23605.1| 335|Homo sapiens RP11-375E1__A.3 protein. 29 8.9
BC021299-1|AAH21299.1| 335|Homo sapiens SAM pointed domain cont... 29 8.9
AF071538-1|AAC95296.1| 335|Homo sapiens Ets transcription facto... 29 8.9
AB031549-1|BAA89543.1| 335|Homo sapiens prostate ets protein. 29 8.9
>BC017020-1|AAH17020.1| 361|Homo sapiens single-stranded DNA
binding protein 2 protein.
Length = 361
Score = 30.3 bits (65), Expect = 5.1
Identities = 23/85 (27%), Positives = 32/85 (37%)
Frame = +1
Query: 145 NMPTISHLPSTNTVGGGLEYMFKDKIGASASAAHTDFFNKNDYNLGGKLNLFKTPSTSLD 324
N P P ++ GGL M + S + D +KN N ++L P T D
Sbjct: 280 NRPNFPMGPGSDGPMGGLGGMESHHMNGSLGSGDMDSISKNSPN---NMSLSNQPGTPRD 336
Query: 325 FTAGWHKFDTPFMKSSWEPSTWFSL 399
F PF S+ PS S+
Sbjct: 337 DGEMGGNFLNPFQSESYSPSMTMSV 361
>AY026275-1|AAK15803.1| 361|Homo sapiens single stranded DNA
binding protein-2 protein.
Length = 361
Score = 30.3 bits (65), Expect = 5.1
Identities = 23/85 (27%), Positives = 32/85 (37%)
Frame = +1
Query: 145 NMPTISHLPSTNTVGGGLEYMFKDKIGASASAAHTDFFNKNDYNLGGKLNLFKTPSTSLD 324
N P P ++ GGL M + S + D +KN N ++L P T D
Sbjct: 280 NRPNFPMGPGSDGPMGGLGGMESHHMNGSLGSGDMDSISKNSPN---NMSLSNQPGTPRD 336
Query: 325 FTAGWHKFDTPFMKSSWEPSTWFSL 399
F PF S+ PS S+
Sbjct: 337 DGEMGGNFLNPFQSESYSPSMTMSV 361
>AK126437-1|BAC86549.1| 229|Homo sapiens protein ( Homo sapiens
cDNA FLJ44473 fis, clone UTERU2030213. ).
Length = 229
Score = 29.9 bits (64), Expect = 6.7
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 122 PRRRSRPEICPPFPIYHQP-TLLVVVSNICSRTRSVHQRAPL 244
PR +SRP C P + H+P T S C + VH++ P+
Sbjct: 160 PRPKSRPASCCPHSLRHRPLTSSPRSSQSCCQLFGVHRQRPI 201
>AK074537-1|BAC11046.1| 361|Homo sapiens protein ( Homo sapiens
cDNA FLJ90056 fis, clone HEMBA1003072, weakly similar to
Gallus gallus single-strand DNA-binding protein csdp
mRNA. ).
Length = 361
Score = 29.9 bits (64), Expect = 6.7
Identities = 23/85 (27%), Positives = 32/85 (37%)
Frame = +1
Query: 145 NMPTISHLPSTNTVGGGLEYMFKDKIGASASAAHTDFFNKNDYNLGGKLNLFKTPSTSLD 324
N P P ++ GGL M + S + D +KN N ++L P T D
Sbjct: 280 NRPNFPMGPGSDGPMGGLGGMESHHMDGSLGSGDMDSISKNSPN---NMSLSNQPGTPRD 336
Query: 325 FTAGWHKFDTPFMKSSWEPSTWFSL 399
F PF S+ PS S+
Sbjct: 337 DGEMGGNFLNPFQSESYSPSMTMSV 361
>BX255973-1|CAH73104.1| 335|Homo sapiens RP11-375E1__A.3 protein.
Length = 335
Score = 29.5 bits (63), Expect = 8.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 400 IMKTKCWVPKRTS*RAYRTCASRQ*SQATWMES*IGSVC 284
I K+ W+ +RTS A CAS S+ +W +S + S C
Sbjct: 208 IWKSAAWMKERTSPGAIHYCAST--SEESWTDSEVDSSC 244
>BX255972-1|CAH73099.1| 335|Homo sapiens RP11-375E1__A.3 protein.
Length = 335
Score = 29.5 bits (63), Expect = 8.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 400 IMKTKCWVPKRTS*RAYRTCASRQ*SQATWMES*IGSVC 284
I K+ W+ +RTS A CAS S+ +W +S + S C
Sbjct: 208 IWKSAAWMKERTSPGAIHYCAST--SEESWTDSEVDSSC 244
>BX255971-1|CAI23605.1| 335|Homo sapiens RP11-375E1__A.3 protein.
Length = 335
Score = 29.5 bits (63), Expect = 8.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 400 IMKTKCWVPKRTS*RAYRTCASRQ*SQATWMES*IGSVC 284
I K+ W+ +RTS A CAS S+ +W +S + S C
Sbjct: 208 IWKSAAWMKERTSPGAIHYCAST--SEESWTDSEVDSSC 244
>BC021299-1|AAH21299.1| 335|Homo sapiens SAM pointed domain
containing ets transcription factor protein.
Length = 335
Score = 29.5 bits (63), Expect = 8.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 400 IMKTKCWVPKRTS*RAYRTCASRQ*SQATWMES*IGSVC 284
I K+ W+ +RTS A CAS S+ +W +S + S C
Sbjct: 208 IWKSAAWMKERTSPGAIHYCAST--SEESWTDSEVDSSC 244
>AF071538-1|AAC95296.1| 335|Homo sapiens Ets transcription factor
PDEF protein.
Length = 335
Score = 29.5 bits (63), Expect = 8.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 400 IMKTKCWVPKRTS*RAYRTCASRQ*SQATWMES*IGSVC 284
I K+ W+ +RTS A CAS S+ +W +S + S C
Sbjct: 208 IWKSAAWMKERTSPGAIHYCAST--SEESWTDSEVDSSC 244
>AB031549-1|BAA89543.1| 335|Homo sapiens prostate ets protein.
Length = 335
Score = 29.5 bits (63), Expect = 8.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 400 IMKTKCWVPKRTS*RAYRTCASRQ*SQATWMES*IGSVC 284
I K+ W+ +RTS A CAS S+ +W +S + S C
Sbjct: 208 IWKSAAWMKERTSPGAIHYCAST--SEESWTDSEVDSSC 244
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,559,738
Number of Sequences: 237096
Number of extensions: 1750402
Number of successful extensions: 3151
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3151
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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