Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_C19
(633 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0026 + 19966616-19966703,19967992-19968058,19968599-199686... 31 1.0
12_02_0566 - 20531659-20531696,20533101-20534094 30 1.8
08_02_1091 + 24256025-24256190,24256806-24257978,24258066-242587... 29 2.3
08_02_0645 - 19666189-19666209,19666330-19666437,19667041-196671... 29 3.1
08_01_0725 - 6480773-6481203,6481802-6482801 29 4.1
07_03_1567 - 27772815-27773302,27773471-27773561,27773641-277739... 29 4.1
09_03_0130 - 12609417-12610462,12610786-12611040,12611139-126112... 28 5.4
05_01_0074 + 506803-507963 28 5.4
07_03_1126 - 24166758-24166879,24166948-24167386,24167708-241678... 28 7.1
01_01_0365 - 2859617-2859722,2860047-2860489,2862232-2862391,286... 28 7.1
01_01_0323 + 2598850-2598924,2599756-2600844,2601352-2602589,260... 28 7.1
09_02_0449 - 9461385-9461431,9461487-9461628,9461733-9461831,946... 27 9.4
09_02_0201 + 5728377-5728584,5729044-5729153,5729231-5729286,572... 27 9.4
08_02_1009 - 23527880-23527884,23528437-23528728 27 9.4
>03_05_0026 +
19966616-19966703,19967992-19968058,19968599-19968677,
19969140-19969231,19969961-19970396,19973749-19974099
Length = 370
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = +2
Query: 29 ISNFKGLKFTSNDLNEGAQVLRSLKEGQE----MFLGAD-TLLAPAALLG 163
+++ KGL T DL ++LRSL+E E M + +D + + PA+LLG
Sbjct: 167 VNDLKGLGATYTDLEVAQKMLRSLQEKYETLVTMLINSDMSRMTPASLLG 216
>12_02_0566 - 20531659-20531696,20533101-20534094
Length = 343
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +2
Query: 302 AEGAWVPIMKAGMEIATGIKVGPPSLPQRPISAEAKQRIQTKLRSLGLTK*NEYERL 472
A VP ++ +++ +K GPP+ EA ++T R LGL + + ER+
Sbjct: 62 ATNVQVPTVQQQCKLSEFLKTGPPTFAMAVDPMEASDWLRTVERKLGLIQCTDQERV 118
>08_02_1091 +
24256025-24256190,24256806-24257978,24258066-24258733,
24258994-24260065,24260241-24260563,24260647-24260835,
24261400-24261506,24262103-24262163,24262617-24262634
Length = 1258
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -2
Query: 584 TISLPL*RHKNHPDTPRPYSFPPTSITLHLTDLQYSLKASHIHS 453
T S+ + + DTPR YSFP + +L L++ H+ S
Sbjct: 289 TDSVEILDQEEDTDTPREYSFPDKRVDENLKILEHQSSECHVRS 332
>08_02_0645 -
19666189-19666209,19666330-19666437,19667041-19667152,
19667321-19667417,19667809-19667911,19668071-19668152,
19668519-19668665,19668763-19668863,19669037-19669231
Length = 321
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 423 VWIRCFASADIGLCGSDGGPTLIPVA 346
+W RC A + + LCG GG L+ A
Sbjct: 1 MWSRCSAGSAVALCGGRGGHRLLSCA 26
>08_01_0725 - 6480773-6481203,6481802-6482801
Length = 476
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 302 AEGAWVPIMKAGMEIATGIKVGPPSLPQRPISAEAKQRIQTKLRSLGLTK*NEYERL 472
A VP ++ +++ +K GPP+ EA ++T + LGL + + ER+
Sbjct: 18 ATNVQVPTVQQQCKLSEFLKTGPPTFAMAVDPMEASDWLRTVEKKLGLIQCTDQERV 74
>07_03_1567 - 27772815-27773302,27773471-27773561,27773641-27773988,
27774929-27775110,27775191-27775368,27775453-27775605,
27775993-27776232,27776369-27776449,27776485-27776730,
27777151-27777240,27777536-27777778,27778365-27778529,
27779017-27779080,27779162-27779286,27779383-27779476,
27779647-27779714,27779798-27779989,27780618-27780752,
27780847-27780934,27781014-27781107,27781484-27781547,
27781657-27781708,27781911-27782014,27782099-27782158,
27782687-27782770,27782892-27783125,27783442-27783864,
27784675-27784736,27784867-27785521
Length = 1700
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 167 KSSIGTSFNLFPKLARDILDAIENNDIAKARALQEKLSLAIEAH 298
KSS+ LF L DA++NN AK L + +A++AH
Sbjct: 1244 KSSVDQQLELFTLLIEGCQDAVKNNMDAKGTVL-DFFGVAVKAH 1286
>09_03_0130 -
12609417-12610462,12610786-12611040,12611139-12611253,
12611376-12611428,12611854-12612114,12612252-12612302,
12612412-12612660,12612779-12613007,12613292-12613666
Length = 877
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -1
Query: 357 IPVAISIPAFIIGTHAPSAVCASMAKLSFSCKALALAMSLF 235
+P + P F+I T A +M +FSC A+A+ F
Sbjct: 443 VPEILFWPVFVIATLAAMIASQAMISATFSCIKQAMALGCF 483
>05_01_0074 + 506803-507963
Length = 386
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -1
Query: 222 SISRASLGNRLNEVPILDFMPRSAAGANSVSAPRNISWPSLRERKTWAPSLR 67
++ R + G R E + G N+ APR ISW S + R T ++R
Sbjct: 272 AVGRFAGGRRPEERELPVVYTEMDGGFNNGGAPRRISWGSRQSRSTERSAIR 323
>07_03_1126 -
24166758-24166879,24166948-24167386,24167708-24167875,
24168388-24168675,24169468-24169575,24169759-24169811,
24170033-24170192,24170353-24170442,24170902-24170953,
24171156-24171283
Length = 535
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 559 IKTIQTPLVHTPSPRRPLR 503
+K +T LVHTP+P PLR
Sbjct: 343 VKKSKTKLVHTPNPPSPLR 361
>01_01_0365 -
2859617-2859722,2860047-2860489,2862232-2862391,
2863431-2863516,2863648-2866272
Length = 1139
Score = 27.9 bits (59), Expect = 7.1
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -1
Query: 366 PTLI-PVAISIPAFIIGTHAPSAVCASMAKLSFSCKALALAMSLFSIASSISRASLGNRL 190
P L+ PV++S+ A + +PS+ +S + + L+LA S S +SS S S + L
Sbjct: 60 PHLVSPVSLSLLALSFLSSSPSSSSSSFSSRHAASLLLSLASSAPSSSSSFSSLSHASSL 119
Query: 189 NEVP 178
+ P
Sbjct: 120 SAFP 123
>01_01_0323 + 2598850-2598924,2599756-2600844,2601352-2602589,
2602637-2602810,2603032-2603098,2603735-2603757,
2603899-2604001,2604087-2604848,2605098-2605292,
2605496-2606115,2606429-2606480,2606558-2607197,
2608366-2608574,2608660-2609189,2609500-2609566,
2609651-2609728,2610415-2610483,2610569-2610643
Length = 2021
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +2
Query: 245 IAKARALQEKLSLAIEAHTAEGAWVPIMKAGMEIATGIKVGPPSLP 382
+AK +A Q K + ++++ +EG VP+ + + +TG+ V SLP
Sbjct: 1177 MAKMKAEQSKFAESMKSSGSEGQDVPMSEPDVSCSTGV-VSEESLP 1221
>09_02_0449 -
9461385-9461431,9461487-9461628,9461733-9461831,
9462052-9462100,9462179-9462212,9462880-9463055,
9463094-9463532,9463784-9463971,9463988-9464496
Length = 560
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = -1
Query: 345 ISIPAFIIGTHAPSAVCASMAKLSFSCKALALAMSLFSIASSIS 214
+S+PA +IG A +AV A+ C +LA+A FS S+++
Sbjct: 236 LSLPALLIGACAAAAVAAAGDGCRAGC-SLAIAAYYFSEGSNLT 278
>09_02_0201 +
5728377-5728584,5729044-5729153,5729231-5729286,
5729396-5729480,5729550-5729597,5729723-5729797,
5729893-5730004,5730371-5730536,5730579-5730630,
5730729-5730786,5731029-5731127,5731219-5731349
Length = 399
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 87 TWAPSLRSFEVNLRPLKFD 31
TW P+L FE +LR KFD
Sbjct: 103 TWVPALNIFETSLRRGKFD 121
>08_02_1009 - 23527880-23527884,23528437-23528728
Length = 98
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 251 KARALQEKLSLAIEAHTAEGAWV 319
+ARA++ K+ LA EA EG W+
Sbjct: 10 EARAVEMKVGLAREARPMEGGWI 32
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,506,324
Number of Sequences: 37544
Number of extensions: 376457
Number of successful extensions: 1064
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1064
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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