Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_C16
         (656 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7RND8 Cluster: Predicted protein; n=1; Nematostella ve...    37   0.49 
UniRef50_Q259Q4 Cluster: H0818H01.15 protein; n=29; Oryza sativa...    34   2.6  
UniRef50_Q2R920 Cluster: Retrotransposon protein, putative, Ty3-...    34   3.5  
UniRef50_P41454 Cluster: Probable apoptosis inhibitor 2; n=15; N...    33   6.0  
UniRef50_Q8QLC4 Cluster: Inhibitor of apoptosis-2 IAP-2; n=2; Nu...    33   8.0  

>UniRef50_A7RND8 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 88

 Score = 36.7 bits (81), Expect = 0.49
 Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = +3

Query: 423 LNLANP--YMFDFLIIITKGSLQ-DLCTCVLCAGVCMECCA 536
           LN  NP  YMF F +I     L   +C C+ C GVC  C A
Sbjct: 41  LNYCNPTLYMFAFWVITASYILMGSICFCICCLGVCASCTA 81


>UniRef50_Q259Q4 Cluster: H0818H01.15 protein; n=29; Oryza sativa|Rep:
            H0818H01.15 protein - Oryza sativa (Rice)
          Length = 1112

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
 Frame = +3

Query: 450  DFLIIITKGSLQDLCTCVL-CAGVCMECCACNAQCMXRVTVSRWR-RRLESPQLGNAARL 623
            ++ I+ T+ +++D+C  VL C G+    C   +  M RV  S WR   +E+ Q G+    
Sbjct: 1050 EWAIVATRPAIRDVCAAVLLCLGLNKGSCPGPSPQMARVGASAWRDPHVETGQAGSVVTE 1109

Query: 624  GW 629
            G+
Sbjct: 1110 GY 1111


>UniRef50_Q2R920 Cluster: Retrotransposon protein, putative,
           Ty3-gypsy subclass; n=2; Oryza sativa|Rep:
           Retrotransposon protein, putative, Ty3-gypsy subclass -
           Oryza sativa subsp. japonica (Rice)
          Length = 1093

 Score = 33.9 bits (74), Expect = 3.5
 Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
 Frame = +3

Query: 324 EQQCEIVSAAKGN*HKDLNL-GLAASCIIKFPRNL--NLANPYMFDFLIIITKGS----L 482
           EQ C+ + +      +D  L   +A CI   P +   N ++  MF  +  +T  +    L
Sbjct: 678 EQFCDCMESFSQKSPQDWKLKDRSAGCIRNTPLDCPSNRSSTDMFQTIARVTLPANPEKL 737

Query: 483 QDLCTCVLCAGVCMECCACNAQCMXRVTVSRWRRRLESPQL 605
           +D  T   CA VC+  C+CNA        S W   L + +L
Sbjct: 738 EDATTQSKCAEVCLSNCSCNAYAYKDSVCSVWHSELLNVKL 778


>UniRef50_P41454 Cluster: Probable apoptosis inhibitor 2; n=15;
           Nucleopolyhedrovirus|Rep: Probable apoptosis inhibitor 2
           - Autographa californica nuclear polyhedrosis virus
           (AcMNPV)
          Length = 249

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +3

Query: 489 LCTCVLCAGVCMECCACNAQCMXRV 563
           L  C  C+  C  CC CNA+ M R+
Sbjct: 220 LAVCTECSRRCKRCCVCNAKIMQRI 244


>UniRef50_Q8QLC4 Cluster: Inhibitor of apoptosis-2 IAP-2; n=2;
           Nucleopolyhedrovirus|Rep: Inhibitor of apoptosis-2 IAP-2
           - Mamestra configurata NPV-A
          Length = 252

 Score = 32.7 bits (71), Expect = 8.0
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 489 LCTCVLCAGVCMECCACNAQCMXRVTV 569
           L TC +CA  C +CC C A+   R+ +
Sbjct: 223 LVTCSVCAKRCKDCCVCRAKIKERLPI 249


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,980,495
Number of Sequences: 1657284
Number of extensions: 10382834
Number of successful extensions: 21224
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21163
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)