Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_C16
         (656 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   2.1  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    23   6.4  
AF063021-1|AAC16246.1|   69|Anopheles gambiae unknown protein.         23   6.4  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   8.5  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +3

Query: 393 ASCIIKFPRNLNLANPYMFDFLIIITKGSLQDLCTCVLCAGVCMECC 533
           A+C+ K P +L   N      +    KG +     CV C GVC + C
Sbjct: 259 ATCVRKCPEHLLKDNGAC---VRKCPKGKMPQNSECVPCKGVCPKTC 302


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 9/24 (37%), Positives = 11/24 (45%), Gaps = 4/24 (16%)
 Frame = +3

Query: 492 CTCVLCAG----VCMECCACNAQC 551
           C  + C+G    VC   C C  QC
Sbjct: 222 CNQITCSGISTEVCRRSCYCGCQC 245


>AF063021-1|AAC16246.1|   69|Anopheles gambiae unknown protein.
          Length = 69

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +3

Query: 510 AGVCMECCACNAQCMXRVTVSRWRRRLESPQLGNAARL 623
           + VC   C C A+    V    +RR L  P L  +  L
Sbjct: 21  SSVCGALCDCAARVQVEVFSRIFRRLLTKPYLSGSGTL 58


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 542 CSMHGTCHC 568
           CS HGTC C
Sbjct: 645 CSGHGTCEC 653


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,406
Number of Sequences: 2352
Number of extensions: 12138
Number of successful extensions: 51
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)