Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_C16
         (656 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49886-6|CAI79131.1|  149|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z49886-5|CAA90055.1|  152|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical pr...    28   6.7  
U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>Z49886-6|CAI79131.1|  149|Caenorhabditis elegans Hypothetical
           protein C06A1.7 protein.
          Length = 149

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 15/46 (32%), Positives = 17/46 (36%), Gaps = 3/46 (6%)
 Frame = +3

Query: 492 CTCVLCAGVCMEC---CACNAQCMXRVTVSRWRRRLESPQLGNAAR 620
           C C  C   C  C   C C   C       R RR L+  Q+  A R
Sbjct: 91  CCCTRCCTCCRPCCCGCGCGCGCCGCGGGGRKRRSLQKLQIDEANR 136


>Z49886-5|CAA90055.1|  152|Caenorhabditis elegans Hypothetical
           protein C06A1.6 protein.
          Length = 152

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 15/46 (32%), Positives = 17/46 (36%), Gaps = 3/46 (6%)
 Frame = +3

Query: 492 CTCVLCAGVCMEC---CACNAQCMXRVTVSRWRRRLESPQLGNAAR 620
           C C  C   C  C   C C   C       R RR L+  Q+  A R
Sbjct: 94  CCCTRCCTCCRPCCCGCGCGCGCCGCGGGGRKRRSLQKLQIDEANR 139


>Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical
           protein T01B7.8 protein.
          Length = 164

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
 Frame = +3

Query: 492 CTCVLCAGVCMEC---CACNAQCMXRVTVSRWRRRLESPQLGNAAR 620
           C C  C   C  C   C C   C       R RR L++ ++ +A R
Sbjct: 105 CCCTRCCTCCRPCCCGCGCGCGCCGCGGGGRKRRSLQNLRIDDANR 150


>U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical
           protein C04G6.10 protein.
          Length = 166

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 3/46 (6%)
 Frame = +3

Query: 492 CTCVLCAGVCMEC---CACNAQCMXRVTVSRWRRRLESPQLGNAAR 620
           C C  C   C  C   C C   C       R RR L++ ++  A R
Sbjct: 106 CCCTRCCTCCRPCCCGCGCGCGCCGCGGGGRKRRSLQNLRIDEANR 151


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,560,681
Number of Sequences: 27780
Number of extensions: 262899
Number of successful extensions: 531
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 531
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)