Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_C16
         (656 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    29   0.039
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.6  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    22   4.5  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    22   5.9  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 29.1 bits (62), Expect = 0.039
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +2

Query: 545 SMHGTCHCIALAATSRISPVGECGPS 622
           +++GT +C +  A+S +   GECGP+
Sbjct: 151 NLNGTVNCTSSIASSGVVSAGECGPA 176


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = -1

Query: 626 PKTGRIPQLGRF*TSPPARYSDTXHALSITRTTLHTHSCT 507
           P  G + Q+G     PPA  S T    +IT TT  T + T
Sbjct: 81  PVPGNLEQIGSRPLHPPA--SSTSLPATITTTTTTTTTTT 118


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/17 (41%), Positives = 8/17 (47%)
 Frame = +1

Query: 475 VPYRTYVPACYVQECVW 525
           VP+ TY P C      W
Sbjct: 150 VPFTTYTPVCEYDHTWW 166


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 526 SIHTPAHNTQVHRSCKEPFVIIIKKS 449
           S+H   HN  VHR  K   +++  K+
Sbjct: 21  SVHHCHHNGVVHRDLKPENLLLASKA 46


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,379
Number of Sequences: 438
Number of extensions: 3413
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)