Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_C13
         (630 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    31   0.008
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    31   0.008
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    25   0.52 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    25   0.52 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   3.7  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 31.1 bits (67), Expect = 0.008
 Identities = 18/73 (24%), Positives = 33/73 (45%)
 Frame = -1

Query: 378 LIILYSTTRPFHMTYFYLINFYFLTFIFLLCLLPWYPAYSCVIQVCTLLATLRIRWYFNH 199
           ++   + T  F  +Y Y    Y L  +F+  +LP++      +Q C  L  LR+R+   +
Sbjct: 154 IVATLTVTIIFFASYQYGTKTYSLFIVFMTVILPYFINLLMELQYCHYLNILRVRYQLLN 213

Query: 198 STLNCTNRCIHRT 160
             L    +  +RT
Sbjct: 214 EYLETLVQETNRT 226


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 31.1 bits (67), Expect = 0.008
 Identities = 18/73 (24%), Positives = 33/73 (45%)
 Frame = -1

Query: 378 LIILYSTTRPFHMTYFYLINFYFLTFIFLLCLLPWYPAYSCVIQVCTLLATLRIRWYFNH 199
           ++   + T  F  +Y Y    Y L  +F+  +LP++      +Q C  L  LR+R+   +
Sbjct: 154 IVATLTVTIIFFASYQYGTKTYSLFIVFMTVILPYFINLLMELQYCHYLNILRVRYQLLN 213

Query: 198 STLNCTNRCIHRT 160
             L    +  +RT
Sbjct: 214 EYLETLVQETNRT 226


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
 Frame = -2

Query: 233 LQLSAFGGTSIIVLLIVLTDVFIELNANAVLVLFN-PLSDENVSLKSFIGLPNTSKMSCT 57
           L+ S F    +  L  +LT   I+ +   +  + N P+  +   +++F+GL N  +  C 
Sbjct: 491 LEKSNFIQKEVKFLGHILTINGIKADPEKISAIRNFPVPQKTKHVRAFLGLCNFYRKFCA 550

Query: 56  ENGAVYAQINKL 21
              A    +NKL
Sbjct: 551 RYSAATQDLNKL 562



 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -3

Query: 601 SKPPTLPLT 575
           +KPPTLP+T
Sbjct: 126 NKPPTLPVT 134


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 103 KETFSSDSGLNKTNTAFAFSSMNTSVSTIKSTMIEVP 213
           K T  SDS L       AF S +TS++ I   + EVP
Sbjct: 863 KRTERSDSALFTCVATNAFGSDDTSINMIVQEVPEVP 899


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 315 YFLTFIFLLCLLP 277
           YFLT IFL  ++P
Sbjct: 237 YFLTIIFLFFIIP 249


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,968
Number of Sequences: 336
Number of extensions: 2647
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)