Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_C09
         (594 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           24   0.84 
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    22   4.5  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   7.8  

>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 24.2 bits (50), Expect = 0.84
 Identities = 12/49 (24%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
 Frame = +2

Query: 71  ANQSSGVVVPRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTH-WTG 214
           ANQ     +  +++  + L+        GTI W L   +D      W G
Sbjct: 185 ANQWYSQTIDNSYQFCDNLQYSFDNQCSGTIDWALPKQEDCFYQEGWNG 233


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +2

Query: 224 GPPRTPYENRMYSLKIE 274
           GPPRTP + ++ + K++
Sbjct: 59  GPPRTPLQPKLVAGKLK 75


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/35 (25%), Positives = 15/35 (42%)
 Frame = +2

Query: 71  ANQSSGVVVPRNFRLLEELEQGQKGVGDGTISWGL 175
           ANQ     +  +++  + L+        GTI W L
Sbjct: 194 ANQWYSQTIDNSYQFCDNLQYSFDNQCSGTIDWAL 228


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,583
Number of Sequences: 336
Number of extensions: 2651
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)