Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_C09
(594 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme Mms2|Schizos... 163 2e-41
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 58 1e-09
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 52 6e-08
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 49 4e-07
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 48 1e-06
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 44 2e-05
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 41 1e-04
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 40 2e-04
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 40 4e-04
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 39 5e-04
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 36 0.006
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 34 0.018
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 33 0.031
SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit Pst... 29 0.51
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 28 0.89
SPAC17A2.06c |vps8||WD repeat protein Vps8|Schizosaccharomyces p... 27 2.7
SPBP8B7.29 |||para-aminobenzoate synthase |Schizosaccharomyces p... 25 6.3
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 25 6.3
SPAC2G11.02 |urb2||ribosome biogenesis protein Urb2 |Schizosacch... 25 8.3
SPBC800.09 |sum2||G2/M transition checkpoint protein Sum2|Schizo... 25 8.3
>SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme
Mms2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 163 bits (395), Expect = 2e-41
Identities = 70/135 (51%), Positives = 99/135 (73%)
Frame = +2
Query: 95 VPRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIE 274
VPRNF+LLEELE+G+KG+G+ + S+GL + DD+TL+ W I+GP + +ENR+YSLKI
Sbjct: 4 VPRNFKLLEELEKGEKGLGESSCSYGLTNADDITLSDWNATILGPAHSVHENRIYSLKIH 63
Query: 275 CDTRYPDEPPTARFISRINMNCVNSQTGLVDNRQVPILARWQRDYTIKTVLQELRRLMTL 454
CD YPD PP F+SRIN+ V+ +TG V+ ++ L W+R+Y+++TVL +L++ M
Sbjct: 64 CDANYPDAPPIVTFVSRINLPGVDGETGKVNPHKIDCLRHWKREYSMETVLLDLKKEMAS 123
Query: 455 KENMKLSQPPEGSTF 499
N KL QPPEGSTF
Sbjct: 124 SSNRKLPQPPEGSTF 138
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 58.0 bits (134), Expect = 1e-09
Identities = 40/121 (33%), Positives = 59/121 (48%), Gaps = 1/121 (0%)
Frame = +2
Query: 101 RNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECD 280
R+ R+ +EL Q+ G W + D ++H GM GP TPYE + + IE
Sbjct: 5 RSRRIAKELADVQQDKQAGIQVWTINDD----ISHLKGMFRGPEGTPYEGGYFVVDIEIP 60
Query: 281 TRYPDEPPTARFISRINMNCVNSQTGLVDNRQVPILA-RWQRDYTIKTVLQELRRLMTLK 457
YP PP F ++I V+SQTG + + IL +W YT+K+ L L+ L+
Sbjct: 61 IDYPFRPPKMNFDTKIYHPNVSSQTGAI---CLDILKDQWSPVYTMKSALISLQSLLCTP 117
Query: 458 E 460
E
Sbjct: 118 E 118
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 52.0 bits (119), Expect = 6e-08
Identities = 37/123 (30%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Frame = +2
Query: 182 DDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGL 361
D D L HW G I GP T YE + + + YP PPT F S + + +
Sbjct: 53 DSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPM----WHPNVDM 108
Query: 362 VDNRQVPILA-RWQRDYTIKTVLQELRRLMTLKENMKLSQPPEGSTF*FI*MEIFSVDPI 538
N + IL +W Y ++T+L L+ L L +P S E++S DPI
Sbjct: 109 SGNICLDILKDKWSAVYNVQTILLSLQSL--------LGEPNNASPLNAQAAELWSKDPI 160
Query: 539 YYE 547
Y+
Sbjct: 161 EYK 163
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 49.2 bits (112), Expect = 4e-07
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Frame = +2
Query: 110 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRY 289
RL+ + ++ Q+ G +S SD+ M W +IIGP TP+E+ + L + D +Y
Sbjct: 8 RLMRDFKRMQQDPPAG-VSASPVSDNVML---WNAVIIGPADTPFEDGTFKLVLSFDEQY 63
Query: 290 PDEPPTARFISRI-NMNCVNSQTGLVDNRQVPILARWQRDYTIKTVLQELRRLMTLKEN 463
P++PP +F+S + + N + +D Q RW Y + +L ++ L+ N
Sbjct: 64 PNKPPLVKFVSTMFHPNVYANGELCLDILQ----NRWSPTYDVAAILTSIQSLLNDPNN 118
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 47.6 bits (108), Expect = 1e-06
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +2
Query: 197 LTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLVDNRQ 376
L HW I+GP +PY ++ L I T YP +PP F +RI +NS +
Sbjct: 30 LFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNINSNGSIC---- 85
Query: 377 VPILA-RWQRDYTIKTVLQELRRLMT 451
+ IL +W TI VL + L+T
Sbjct: 86 LDILRDQWSPALTISKVLLSICSLLT 111
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 43.6 bits (98), Expect = 2e-05
Identities = 25/73 (34%), Positives = 35/73 (47%)
Frame = +2
Query: 110 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRY 289
RL +E Q G G + L+ D+ + HW +I GP TPYE + L I Y
Sbjct: 7 RLHKEYASFQAGDISGLLL--LKPVTDVDMFHWKAVIEGPTETPYEGGQWVLDIHVHEGY 64
Query: 290 PDEPPTARFISRI 328
P PP+ F ++I
Sbjct: 65 PISPPSVYFQTKI 77
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 41.1 bits (92), Expect = 1e-04
Identities = 23/69 (33%), Positives = 38/69 (55%)
Frame = +2
Query: 110 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRY 289
RL++E ++ + DG I+ G ++DD W +I GP TP+E +Y ++ + Y
Sbjct: 9 RLMKEYKELTENGPDG-ITAGPSNEDDFFT--WDCLIQGPDGTPFEGGLYPATLKFPSDY 65
Query: 290 PDEPPTARF 316
P PPT +F
Sbjct: 66 PLGPPTLKF 74
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 40.3 bits (90), Expect = 2e-04
Identities = 26/88 (29%), Positives = 37/88 (42%)
Frame = +2
Query: 197 LTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLVDNRQ 376
+ W +I GPP TPYE Y + YP +PP R I+ N++ L +
Sbjct: 34 ILEWHYIITGPPDTPYEGGQYHGTLIFPPDYPFKPPAIRMITPSGRFQTNTRLCLSFSDF 93
Query: 377 VPILARWQRDYTIKTVLQELRRLMTLKE 460
P W + + T+L L MT E
Sbjct: 94 HP--KSWNPSWMVSTILVGLVSFMTSDE 119
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 39.5 bits (88), Expect = 4e-04
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 110 RLLEELEQGQKGVGDGTISWGLESDDD-MTLTHWTGMIIGPPRTPYENRMYSLKIECDTR 286
RL EE +Q ++ G + +S D + L +W I G P+T +E +Y L +
Sbjct: 8 RLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEE 67
Query: 287 YPDEPPTARF 316
YP PP RF
Sbjct: 68 YPTRPPKCRF 77
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 39.1 bits (87), Expect = 5e-04
Identities = 25/72 (34%), Positives = 35/72 (48%)
Frame = +2
Query: 113 LLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYP 292
L ++L++ QK G S GL DD ++ W MIIGP T YE + + YP
Sbjct: 10 LRKQLKEIQKNPPQG-FSVGLV--DDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQDYP 66
Query: 293 DEPPTARFISRI 328
PP +F + I
Sbjct: 67 LMPPKMKFTTEI 78
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 35.5 bits (78), Expect = 0.006
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +2
Query: 188 DMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRI 328
D L HW +GP + Y + ++ YP +PPT F +RI
Sbjct: 33 DDNLFHWACTALGPSDSVYAGGKFHFSLKFPLDYPFQPPTIEFTTRI 79
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 33.9 bits (74), Expect = 0.018
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +2
Query: 224 GPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLV 364
GP TPY ++ + +E + YP + P+ F++RI ++ +G V
Sbjct: 38 GPSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSV 84
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 33.1 bits (72), Expect = 0.031
Identities = 26/113 (23%), Positives = 52/113 (46%)
Frame = +2
Query: 110 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRY 289
R+++E+E + G ++ E + L ++ + GP ++ YE + L++ Y
Sbjct: 6 RIIKEIETLTRDPPPGIVAAPTEDN----LRYFKITMEGPQQSAYEGGKFHLELFLPDEY 61
Query: 290 PDEPPTARFISRINMNCVNSQTGLVDNRQVPILARWQRDYTIKTVLQELRRLM 448
P PP RF+++I V+ + + + W I+TVL ++ LM
Sbjct: 62 PMMPPNVRFLTKIYHPNVDKLGRICLS---TLKKDWSPALQIRTVLLSIQALM 111
>SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit
Pst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1075
Score = 29.1 bits (62), Expect = 0.51
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Frame = +2
Query: 104 NFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHW----TGMIIGPPRTPYENRMYSLKI 271
++RLL E+ G +WG+ +DD ++ W +G I+ +TPYE M L+
Sbjct: 340 SYRLLPVEERNISCSGRDDFAWGILNDDWVSHPTWASEESGFIV-QRKTPYEEAMTKLEE 398
Query: 272 E 274
E
Sbjct: 399 E 399
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 28.3 bits (60), Expect = 0.89
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +2
Query: 221 IGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRI 328
I P Y+ + +I+ D YP +PP + +++I
Sbjct: 58 IRPDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKI 93
>SPAC17A2.06c |vps8||WD repeat protein Vps8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1272
Score = 26.6 bits (56), Expect = 2.7
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = -3
Query: 463 VLLKCHETPKLL*NCLDSVITLPSCKDWNLPIINKSSLTVDTVHIDS 323
VLL K+ + +++ C WNL + +SL +D++ +D+
Sbjct: 200 VLLSTDHLGKIAVHEFYNLVINKHCTSWNLDMSKSNSLNLDSIIVDT 246
>SPBP8B7.29 |||para-aminobenzoate synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 718
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 101 RNFRLLEELEQGQKGVGDGTISW 169
R+ R+LE LEQ +G+ GT+ +
Sbjct: 628 RSVRMLEPLEQHGRGIYSGTLGY 650
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase
kinase Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 25.4 bits (53), Expect = 6.3
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -3
Query: 394 SCKDWNLPIINKSSLTVDTVHIDSRNKTSCRWLIRITSI 278
S +W ++N SL D + + +NK W +TS+
Sbjct: 291 STVNWVQSVLNLPSLLSDDLMANPKNKERFEWQYMLTSV 329
>SPAC2G11.02 |urb2||ribosome biogenesis protein Urb2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 25.0 bits (52), Expect = 8.3
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = -3
Query: 370 IINKSSLTVDTVHIDSRNKTSCRWLIRITSITFNFKRIHSIFIRSPGGTNYHASPMSKS 194
++ + +L V + + T C L I+ N K I FI N+H S + KS
Sbjct: 223 VLTQHTLDVLLLTKKDSSMTLCSLLNAISFEPINLKAIPLFFIICADSINFHLSSVEKS 281
>SPBC800.09 |sum2||G2/M transition checkpoint protein
Sum2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 25.0 bits (52), Expect = 8.3
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = -2
Query: 254 FYFHKESWGDQLSCQSNE--*ESCHRRSL 174
FY K+S+ D +SC+S E E+ RR+L
Sbjct: 336 FYKPKQSFFDNISCESKEKGMEAADRRAL 364
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,330,401
Number of Sequences: 5004
Number of extensions: 43558
Number of successful extensions: 108
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 108
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 258201856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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