Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_C09
         (594 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.)              60   1e-09
SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.)              58   7e-09
SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)                47   1e-05
SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)              44   7e-05
SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39)                  39   0.003
SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06)                38   0.005
SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)                36   0.019
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)                      36   0.019
SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)                 35   0.057
SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)                      35   0.057
SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)                      34   0.099
SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.)               34   0.099
SB_31989| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.13 
SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.13 
SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.93 
SB_37359| Best HMM Match : RVT_1 (HMM E-Value=3.5e-18)                 29   2.1  
SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8)                    28   6.5  
SB_28318| Best HMM Match : GLTT (HMM E-Value=6.9e-26)                  27   8.6  
SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017)                 27   8.6  
SB_8182| Best HMM Match : ATP-synt_E (HMM E-Value=1.8)                 27   8.6  
SB_3703| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   8.6  

>SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 79

 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 26/50 (52%), Positives = 37/50 (74%)
 Frame = +2

Query: 236 TPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLVDNRQVPI 385
           T +ENR+Y+LKI C   YP +PPT +F+S+INMN VNS+ G  D+R+  +
Sbjct: 1   TVFENRIYNLKIVCGPNYPQKPPTVKFVSKINMNGVNSK-GETDDREAEL 49


>SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 41

 Score = 57.6 bits (133), Expect = 7e-09
 Identities = 23/39 (58%), Positives = 31/39 (79%)
 Frame = +2

Query: 236 TPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQ 352
           T +ENR+Y+LKI C   YP +PPT +F+S+INMN VNS+
Sbjct: 1   TVFENRIYNLKIVCGPNYPQKPPTVKFVSKINMNGVNSK 39


>SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)
          Length = 190

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
 Frame = +2

Query: 218 IIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRI-NMNCVNSQTGLVDNRQVPILAR 394
           +IG   TPY   ++ L I+   RYP EPP  RF++ I + N  +S    +D  ++P    
Sbjct: 2   LIGAEGTPYHKGIFKLDIQIPERYPFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPPKGM 61

Query: 395 WQRDYTIKTVLQELRRLM 448
           W+    I +VL  +  LM
Sbjct: 62  WKPALNISSVLSTILILM 79


>SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 473

 Score = 44.4 bits (100), Expect = 7e-05
 Identities = 20/48 (41%), Positives = 24/48 (50%)
 Frame = +2

Query: 185 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRI 328
           DD  L  W  M++GPP T YE   +   +     YP  PPT  FIS I
Sbjct: 358 DDEDLYKWEIMVVGPPGTYYEEGYFKASMVFPKEYPQRPPTLTFISDI 405


>SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39)
          Length = 841

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 18/39 (46%), Positives = 20/39 (51%)
 Frame = +2

Query: 188 DMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPP 304
           D T T   G I GPP TP+E   Y+L I     YP  PP
Sbjct: 683 DETFTKLKGEIRGPPETPFEGGTYNLDIVIPETYPFNPP 721


>SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06)
          Length = 739

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +2

Query: 215 MIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRIN 331
           MI GP  TPY++ +++  I     YPD PP+  ++S  N
Sbjct: 639 MIEGPAGTPYDHGLFAFDILLPANYPDAPPSFHYLSMCN 677


>SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)
          Length = 181

 Score = 36.3 bits (80), Expect = 0.019
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +2

Query: 197 LTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNS 349
           L  W   I+GPP + YE  ++ L I   T YP +PP      R+++    S
Sbjct: 51  LYEWYSTILGPPGSVYEGGVFFLDIHFPTDYPFKPPKVGQAIRLSLYTTES 101


>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
          Length = 1282

 Score = 36.3 bits (80), Expect = 0.019
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = +2

Query: 173  LESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRI 328
            +E  D+     W   I GPP T Y    +   +     YP  PPT RF++++
Sbjct: 1146 VEVPDESNTFEWDVAIFGPPGTLYAGGYFKAHMSFPHDYPYSPPTFRFLTKM 1197


>SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)
          Length = 200

 Score = 34.7 bits (76), Expect = 0.057
 Identities = 18/47 (38%), Positives = 25/47 (53%)
 Frame = +2

Query: 164 SWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPP 304
           S G + DD   L  W   I+GPP + YE  ++ L I   + YP +PP
Sbjct: 156 SAGPKGDD---LYEWYSTILGPPGSVYEGGVFFLDIHFPSDYPFKPP 199


>SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)
          Length = 226

 Score = 34.7 bits (76), Expect = 0.057
 Identities = 18/47 (38%), Positives = 25/47 (53%)
 Frame = +2

Query: 164 SWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPP 304
           S G + DD   L  W   I+GPP + YE  ++ L I   + YP +PP
Sbjct: 116 SAGPKGDD---LYEWYSTILGPPGSVYEGGVFFLDIHFPSDYPFKPP 159


>SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)
          Length = 145

 Score = 33.9 bits (74), Expect = 0.099
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +2

Query: 185 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRI 328
           D+  + +W G+I+ P   PY    + ++I     YP +PP   F ++I
Sbjct: 19  DESNILYWQGLIV-PEMPPYNKGAFRIEICFPAEYPFKPPKITFKTKI 65


>SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 151

 Score = 33.9 bits (74), Expect = 0.099
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +2

Query: 185 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFIS 322
           DD+   H   +I GP  TPYE   +   I C   YP  PP  + ++
Sbjct: 8   DDIPKIH--ALITGPFDTPYEGGFFYFLIRCPPDYPIRPPRVKLMT 51


>SB_31989| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1498

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 18/63 (28%), Positives = 33/63 (52%)
 Frame = -3

Query: 379 NLPIINKSSLTVDTVHIDSRNKTSCRWLIRITSITFNFKRIHSIFIRSPGGTNYHASPMS 200
           ++PI +K+SL ++  +    + ++    I +  +  NFK   S+   SPGG N H   + 
Sbjct: 192 HIPICSKASLEMEYPNGTKIDVSNTSKPIEVRIVQKNFKAKSSVHTLSPGGCNCHLVTIY 251

Query: 199 KSH 191
           K+H
Sbjct: 252 KNH 254


>SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 385

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 22/87 (25%), Positives = 36/87 (41%)
 Frame = +2

Query: 197 LTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLVDNRQ 376
           L  W   + GPP T +    Y  +I     YP +PP+   ++      +  +  L  +  
Sbjct: 38  LFEWHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPPSIMLLTPNGRFEIGKKICLSMSAH 97

Query: 377 VPILARWQRDYTIKTVLQELRRLMTLK 457
            P    WQ  ++I+TVL  +   M  K
Sbjct: 98  HP--ETWQPSWSIRTVLMAIIGFMPTK 122


>SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 710

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
 Frame = +2

Query: 158 TISWG-LESDDDMT----LTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPT-ARFI 319
           T S+G +ES  ++T    L  +     GP  TPYE  ++ ++++   +YP + P+ A F 
Sbjct: 29  TDSFGRIESKHEVTILGGLNEFIVKFFGPVGTPYEGGVWKVRVDLPEKYPFKSPSIANFT 88

Query: 320 SRINMNCV 343
             I++ CV
Sbjct: 89  IEISV-CV 95


>SB_37359| Best HMM Match : RVT_1 (HMM E-Value=3.5e-18)
          Length = 435

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = -3

Query: 451 CHETPKLL*NCLDSVITLPSCKDWNLPIINKSSLTVDTV 335
           CH+ P    +C D ++T   C D++L  +++  L + T+
Sbjct: 375 CHDLPLTTMDCHDLLLTTMDCHDFSLTTMDRHDLPLTTM 413


>SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8)
          Length = 55

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/49 (26%), Positives = 21/49 (42%)
 Frame = +2

Query: 185 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRIN 331
           D+  +     ++ GP  TPY    +   I     YP+ PP  + I+  N
Sbjct: 1   DENRMDFARALVTGPVDTPYSRGCFVFDIFFPGTYPNVPPLVKLITTGN 49


>SB_28318| Best HMM Match : GLTT (HMM E-Value=6.9e-26)
          Length = 422

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -3

Query: 451 CHETPKLL*NCLDSVITLPSCKDWNLPIINKSSLTVDTV 335
           CH+ P    +C DS +T   C+D  L  ++   L + T+
Sbjct: 13  CHDLPLTTMDCHDSPLTTMGCRDLPLTTMDCHDLPLTTM 51


>SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017)
          Length = 123

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = +2

Query: 197 LTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFIS 322
           L  W   + GPP T +    Y  +I     YP +PP+   ++
Sbjct: 3   LFEWHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPPSIMLLT 44


>SB_8182| Best HMM Match : ATP-synt_E (HMM E-Value=1.8)
          Length = 520

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +2

Query: 401 RDYTIKTVLQELRRLMTLKENMKLSQ 478
           RD+ IKT+     RL T+++N+ LSQ
Sbjct: 94  RDHLIKTMKSAQLRLKTIRKNLTLSQ 119


>SB_3703| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 930

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 15/55 (27%), Positives = 24/55 (43%)
 Frame = -3

Query: 394 SCKDWNLPIINKSSLTVDTVHIDSRNKTSCRWLIRITSITFNFKRIHSIFIRSPG 230
           S  DW +P    +S+ V    I      S   +I  + +  NF  I+  F+ +PG
Sbjct: 190 SMPDWKMPTQGNNSMQVVRAVIQG---ISAHHVINSSDLVHNFSHIYDFFMFTPG 241


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,236,646
Number of Sequences: 59808
Number of extensions: 325733
Number of successful extensions: 705
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1427401750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)