Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_C09
(594 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 187 5e-48
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 58 5e-09
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 54 1e-07
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 54 1e-07
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 51 7e-07
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 51 7e-07
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 44 8e-05
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 41 6e-04
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 41 8e-04
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 38 0.004
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 38 0.007
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 34 0.066
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 34 0.088
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 33 0.15
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 32 0.27
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 32 0.35
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 31 0.47
Z19155-3|CAA79558.2| 812|Caenorhabditis elegans Hypothetical pr... 31 0.62
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 31 0.62
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 30 1.1
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 29 2.5
AC090999-9|AAK26153.1| 41|Caenorhabditis elegans Hypothetical ... 29 2.5
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 3.3
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 3.3
AC024798-1|AAK29914.3| 722|Caenorhabditis elegans Hypothetical ... 29 3.3
U23139-5|AAN65330.1| 374|Caenorhabditis elegans Hypothetical pr... 28 5.8
AF047651-5|AAC02722.2| 702|Caenorhabditis elegans Germline-enha... 28 5.8
L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family... 27 7.6
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 187 bits (456), Expect = 5e-48
Identities = 83/138 (60%), Positives = 103/138 (74%), Gaps = 1/138 (0%)
Frame = +2
Query: 89 VVVPRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLK 268
V VPRNFRLLEELE+GQKG GDG ISWGLE D DMTLT WT IIGPPRTPYE+R+Y+L+
Sbjct: 2 VDVPRNFRLLEELEEGQKGKGDGNISWGLEDDSDMTLTRWTASIIGPPRTPYESRIYNLQ 61
Query: 269 IECDTRYPDEPPTARFISRINMNCVNSQTGLVDNRQVPILARWQRDYTIKTVLQELRR-L 445
I+C YP EPPT RF ++++M VN G++D R + L W Y IKTVL+++R+ +
Sbjct: 62 IQCGGNYPREPPTVRFTTKVHMVGVNQSNGVIDKRNLTTLRNWSNSYMIKTVLEDIRKNM 121
Query: 446 MTLKENMKLSQPPEGSTF 499
M KEN+KL QP EG+ F
Sbjct: 122 MMAKENLKLQQPAEGAMF 139
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 58.0 bits (134), Expect = 5e-09
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = +2
Query: 197 LTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLVDNRQ 376
LT G I GPP TPY M+ L I+ +YP PP +F ++I V+SQTG++
Sbjct: 36 LTEIKGHIRGPPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVI---C 92
Query: 377 VPILA-RWQRDYTIKTVLQELRRLMTLKE 460
+ IL +W T++TVL ++ LM E
Sbjct: 93 LDILKDQWAASLTLRTVLLSIQALMCTPE 121
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 53.6 bits (123), Expect = 1e-07
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Frame = +2
Query: 89 VVVPRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLK 268
+ P RL+ + ++ Q+ G G ++D++ LT W +I GP TP+E+ + L
Sbjct: 1 MTTPSRRRLMRDFKKLQEDPPAGVS--GAPTEDNI-LT-WEAIIFGPQETPFEDGTFKLS 56
Query: 269 IECDTRYPDEPPTARFISRI-NMNCVNSQTGLVDNRQVPILARWQRDYTIKTVLQELRRL 445
+E YP++PPT +FIS++ + N + +D Q RW Y + +L ++ L
Sbjct: 57 LEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDILQ----NRWSPTYDVAAILTSIQSL 112
Query: 446 M 448
+
Sbjct: 113 L 113
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 53.6 bits (123), Expect = 1e-07
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Frame = +2
Query: 89 VVVPRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLK 268
+ P RL+ + ++ Q+ G G ++D++ LT W +I GP TP+E+ + L
Sbjct: 1 MTTPSRRRLMRDFKKLQEDPPAGVS--GAPTEDNI-LT-WEAIIFGPQETPFEDGTFKLS 56
Query: 269 IECDTRYPDEPPTARFISRI-NMNCVNSQTGLVDNRQVPILARWQRDYTIKTVLQELRRL 445
+E YP++PPT +FIS++ + N + +D Q RW Y + +L ++ L
Sbjct: 57 LEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDILQ----NRWSPTYDVAAILTSIQSL 112
Query: 446 M 448
+
Sbjct: 113 L 113
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 50.8 bits (116), Expect = 7e-07
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +2
Query: 197 LTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLVDNRQ 376
L HW I+GPP +PY+ ++ L I T YP +PP F +RI +NS +
Sbjct: 30 LFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSIC---- 85
Query: 377 VPIL-ARWQRDYTIKTVLQELRRLM 448
+ IL ++W TI VL + L+
Sbjct: 86 LDILRSQWSPALTISKVLLSICSLL 110
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 50.8 bits (116), Expect = 7e-07
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +2
Query: 197 LTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLVDNRQ 376
L HW I+GPP +PY+ ++ L I T YP +PP F +RI +NS +
Sbjct: 30 LFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSIC---- 85
Query: 377 VPIL-ARWQRDYTIKTVLQELRRLM 448
+ IL ++W TI VL + L+
Sbjct: 86 LDILRSQWSPALTISKVLLSICSLL 110
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 44.0 bits (99), Expect = 8e-05
Identities = 23/59 (38%), Positives = 32/59 (54%)
Frame = +2
Query: 152 DGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRI 328
DG S GL D+D + W ++IGPP T YE + ++ YP +PP +FIS I
Sbjct: 21 DG-FSAGLVDDND--IYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEI 76
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 41.1 bits (92), Expect = 6e-04
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Frame = +2
Query: 206 WTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRI-NMN-------CVNSQTGL 361
WT I GPP+T Y+ + I + YP PP+ +F +++ + N C++
Sbjct: 42 WTVGIYGPPKTLYQGGYFKASIRFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISILHSP 101
Query: 362 VDNRQVPILA--RWQRDYTIKTVLQELRRLM 448
+D+ Q LA RW +++T+L + L+
Sbjct: 102 IDDPQSGELACERWNPTQSVRTILLSVISLL 132
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 40.7 bits (91), Expect = 8e-04
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 16/99 (16%)
Frame = +2
Query: 212 GMIIGPPRTPYENRMYSLKIECDTRYPDEPP---------------TARFISRINMNCVN 346
G I GP TPY + +K++ YP EPP A+F++RI ++
Sbjct: 55 GFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNIS 114
Query: 347 SQTGLVDNRQVPILA-RWQRDYTIKTVLQELRRLMTLKE 460
SQTG + + IL +W T++TVL L+ ++ E
Sbjct: 115 SQTGTI---CLDILKDKWTASLTLRTVLLSLQAMLCSPE 150
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/87 (25%), Positives = 39/87 (44%)
Frame = +2
Query: 188 DMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLVD 367
+ + W +IIG P+TPYE +Y K+ +P +PP ++ N++ L
Sbjct: 34 ETNILEWRYIIIGAPKTPYEGGIYMGKLLFPKDFPFKPPAILMLTPNGRFQTNTRLCLSI 93
Query: 368 NRQVPILARWQRDYTIKTVLQELRRLM 448
+ P W +T+ T++ L M
Sbjct: 94 SDYHP--DTWNPAWTVSTIITGLMSFM 118
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 37.5 bits (83), Expect = 0.007
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 212 GMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRI 328
G+I G TPYE ++ L I+ YP + PT +FI++I
Sbjct: 383 GIIKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKI 421
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 34.3 bits (75), Expect = 0.066
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 215 MIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLVDNRQV--PIL 388
+I GP TPY N ++ I T YP PP F++ + N V L ++ ++ IL
Sbjct: 448 LISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGN-VRFNPNLYNDGKICLSIL 506
Query: 389 ARWQ 400
W+
Sbjct: 507 GTWE 510
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 33.9 bits (74), Expect = 0.088
Identities = 13/47 (27%), Positives = 28/47 (59%)
Frame = +2
Query: 224 GPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLV 364
GP T YEN ++ ++++ +YP + P+ F+++I ++ +G V
Sbjct: 41 GPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTV 87
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 33.1 bits (72), Expect = 0.15
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +2
Query: 110 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRY 289
RL+ E ++ +G I+ ++ D+ W +I GP T + N ++ +I Y
Sbjct: 8 RLMTEYKELTTRPPEGIIAAPIDEDN---FFEWECLITGPEETCFANGVFPARITFPQDY 64
Query: 290 PDEPPTARF 316
P PP RF
Sbjct: 65 PLSPPKMRF 73
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 32.3 bits (70), Expect = 0.27
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +2
Query: 185 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLV 364
D+ ++ MI GP +P+ ++ L++ YP P RF+++I ++ + G +
Sbjct: 29 DESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMAAPKVRFMTKIYHPNID-KLGRI 87
Query: 365 DNRQVPILA-RWQRDYTIKTVLQELRRLMT 451
+ IL +W I+TVL ++ L++
Sbjct: 88 ---CLDILKDKWSPALQIRTVLLSIQALLS 114
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 31.9 bits (69), Expect = 0.35
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 164 SWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKI 271
S G DD L HW I+GPP +PY+ ++ L I
Sbjct: 22 STGSVGDD---LYHWQATIMGPPESPYQGGIFFLTI 54
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 31.5 bits (68), Expect = 0.47
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +2
Query: 218 IIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNC-VNSQTGLV 364
I GP TPYE ++ + + YP+ P +F + I NC V TG V
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYPNALPQIKFQTLI-WNCAVEPSTGQV 83
>Z19155-3|CAA79558.2| 812|Caenorhabditis elegans Hypothetical
protein F54G8.2 protein.
Length = 812
Score = 31.1 bits (67), Expect = 0.62
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +2
Query: 149 GDGTISWGLESDDDMTLTH 205
GDGTI W LES D MT H
Sbjct: 485 GDGTIGWVLESMDKMTFPH 503
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 31.1 bits (67), Expect = 0.62
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +2
Query: 185 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRI 328
++ L WT ++I P + PY + + I YP +PP F ++I
Sbjct: 28 EETNLLKWTVLLI-PDKEPYNKGAFKVGITFPVDYPFKPPKVAFETKI 74
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/70 (24%), Positives = 31/70 (44%)
Frame = +2
Query: 110 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRY 289
RL++EL Q + +G + + +D L W ++G T Y ++ L+ +Y
Sbjct: 8 RLMKELAQLKSEAPEGLLVDNTSTSND--LKQWKIGVVGAEGTLYAGEVFMLQFTFGPQY 65
Query: 290 PDEPPTARFI 319
P P F+
Sbjct: 66 PFNSPEVMFV 75
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 29.1 bits (62), Expect = 2.5
Identities = 19/80 (23%), Positives = 40/80 (50%)
Frame = +2
Query: 242 YENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLVDNRQVPILARWQRDYTIKT 421
Y+N +++L ++ + YP +PP +F + V+ T + + + + W+ + T++
Sbjct: 57 YKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNVDPVTCELCSPML-LQENWKPETTMED 115
Query: 422 VLQELRRLMTLKENMKLSQP 481
V L L+ L LS+P
Sbjct: 116 V---LLNLIVLLNEPDLSRP 132
>AC090999-9|AAK26153.1| 41|Caenorhabditis elegans Hypothetical
protein Y82E9BR.5 protein.
Length = 41
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 424 NCLDSVITLPSCKDWNLPIINKSSLTV 344
NCL I LP+C W+ P + +++L+V
Sbjct: 7 NCLKICIQLPNCNTWSFP-VKRATLSV 32
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = +2
Query: 176 ESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCV 343
+ D++ L G PR +N+++ KI+C + + + P F+ R C+
Sbjct: 56 DGSDEVCLPWQFDCQFGSPRCISKNKLHDKKIDCYSGFDEGCPAHYFVCRDRSACI 111
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = +2
Query: 176 ESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCV 343
+ D++ L G PR +N+++ KI+C + + + P F+ R C+
Sbjct: 56 DGSDEVCLPWQFDCQFGSPRCISKNKLHDKKIDCYSGFDEGCPAHYFVCRDRSACI 111
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane
cell adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = +2
Query: 176 ESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCV 343
+ D++ L G PR +N+++ KI+C + + + P F+ R C+
Sbjct: 56 DGSDEVCLPWQFDCQFGSPRCISKNKLHDKKIDCYSGFDEGCPAHYFVCRDRSACI 111
>AC024798-1|AAK29914.3| 722|Caenorhabditis elegans Hypothetical
protein Y48G9A.10 protein.
Length = 722
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 104 NFRLLEELEQGQKGVGDGTISWGLESDDDMTL 199
N +LLE +E Q + T WG+E+ D M++
Sbjct: 358 NKKLLEVIETSQYVISMDTAKWGVETSDKMSV 389
>U23139-5|AAN65330.1| 374|Caenorhabditis elegans Hypothetical
protein F13H8.3 protein.
Length = 374
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -3
Query: 346 VDTVHIDSRNKTSCRWLIRITSITFNFKRIHSIFIRSPGGTNYHASPMSKSHVI 185
VD S NK WL + +N KR++ + IR+ ++ S + ++I
Sbjct: 317 VDRAFKTSSNKNDANWLSQTFVTEYNVKRVNEMLIRAVKLSDQSTSSKLQDNII 370
>AF047651-5|AAC02722.2| 702|Caenorhabditis elegans
Germline-enhanced at-hook proteinprotein 1 protein.
Length = 702
Score = 27.9 bits (59), Expect = 5.8
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = +2
Query: 242 YENRMYSLKIECD-TRYPDEPPTARFISRINMNCVNSQ--TGLVDNRQVPIL-ARWQRDY 409
++ ++KI D TR PD PP ISR N D+ + L +R+QR
Sbjct: 182 FDEEEEAIKIMADPTRPPDLPPQRSLISRFESNRTKRDIFRNSYDSDEEEFLRSRYQRAV 241
Query: 410 TIKTVLQELRRLMTLKENMKLSQPPEG 490
T +L+ R+ + +E+ +S+P EG
Sbjct: 242 TPPPILE--RQSGSTRES--VSEPSEG 264
>L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family
protein 3 protein.
Length = 3343
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 409 VITLPSCKDWNLPIINKSSLTVDTV 335
V+T P+ WNL IIN+S TV ++
Sbjct: 2803 VVTSPANSTWNLRIINESPETVKSL 2827
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,911,886
Number of Sequences: 27780
Number of extensions: 247728
Number of successful extensions: 562
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 561
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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