Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_C09
(594 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 184 4e-47
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 184 5e-47
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 180 9e-46
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 179 1e-45
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 177 3e-45
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 169 2e-42
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 53 1e-07
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 53 2e-07
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 52 3e-07
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 50 2e-06
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 50 2e-06
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 50 2e-06
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 49 3e-06
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 48 6e-06
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 47 8e-06
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 47 1e-05
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 45 3e-05
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 44 6e-05
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 44 1e-04
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 44 1e-04
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 43 1e-04
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 43 1e-04
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 43 1e-04
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 43 1e-04
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 43 2e-04
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 42 2e-04
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 42 2e-04
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 42 3e-04
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 41 5e-04
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 40 0.001
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 40 0.001
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 40 0.002
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 40 0.002
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 39 0.003
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 39 0.003
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 38 0.004
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 38 0.004
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 38 0.007
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 38 0.007
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 36 0.020
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 36 0.027
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 36 0.027
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 35 0.047
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 34 0.082
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 34 0.082
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 32 0.25
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 32 0.25
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 32 0.33
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 31 0.44
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 30 1.0
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 29 1.8
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 29 1.8
At2g41660.1 68415.m05147 expressed protein contains Pfam profile... 29 2.3
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 29 3.1
At5g16590.1 68418.m01942 leucine-rich repeat transmembrane prote... 28 4.1
At2g31030.1 68415.m03783 oxysterol-binding family protein simila... 27 7.1
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 184 bits (448), Expect = 4e-47
Identities = 79/139 (56%), Positives = 105/139 (75%)
Frame = +2
Query: 83 SGVVVPRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYS 262
S VVVPRNFRLLEELE+G+KG+GDGT+S+G++ DD+ + WTG IIGP T +E R+Y
Sbjct: 7 SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQ 66
Query: 263 LKIECDTRYPDEPPTARFISRINMNCVNSQTGLVDNRQVPILARWQRDYTIKTVLQELRR 442
LK+ CD YP++PPT RF SRINM CVN TG+VD+++ +LA WQR YT++ +L +L++
Sbjct: 67 LKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDILTQLKK 126
Query: 443 LMTLKENMKLSQPPEGSTF 499
M N KL QPPEG+ F
Sbjct: 127 EMAASHNRKLVQPPEGTFF 145
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 184 bits (447), Expect = 5e-47
Identities = 78/144 (54%), Positives = 109/144 (75%)
Frame = +2
Query: 68 MANQSSGVVVPRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYE 247
+ + S VVVPRNFRLLEELE+G+KG+GDGT+S+G++ DD+ + WTG IIGP T +E
Sbjct: 3 LGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHE 62
Query: 248 NRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLVDNRQVPILARWQRDYTIKTVL 427
R+Y LK+ CD YP++PPT RF SR+NM CVN +TG+VD ++ +LA WQR+YT++ +L
Sbjct: 63 GRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDIL 122
Query: 428 QELRRLMTLKENMKLSQPPEGSTF 499
+L++ M+ N KL QPPEG+ F
Sbjct: 123 VQLKKEMSTSHNRKLVQPPEGTCF 146
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 180 bits (437), Expect = 9e-46
Identities = 79/140 (56%), Positives = 105/140 (75%), Gaps = 1/140 (0%)
Frame = +2
Query: 83 SGVVVPRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPR-TPYENRMY 259
S VVVPRNFRLLEELE+G+KG+GDGT+S+G++ DD+ + WTG IIGP T +E R+Y
Sbjct: 7 SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNVTVHEGRIY 66
Query: 260 SLKIECDTRYPDEPPTARFISRINMNCVNSQTGLVDNRQVPILARWQRDYTIKTVLQELR 439
LK+ CD YP++PPT RF SRINM CVN TG+VD+++ +LA WQR YT++ +L +L+
Sbjct: 67 QLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDILTQLK 126
Query: 440 RLMTLKENMKLSQPPEGSTF 499
+ M N KL QPPEG+ F
Sbjct: 127 KEMAASHNRKLVQPPEGTFF 146
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 179 bits (436), Expect = 1e-45
Identities = 78/145 (53%), Positives = 109/145 (75%), Gaps = 1/145 (0%)
Frame = +2
Query: 68 MANQSSGVVVPRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPR-TPY 244
+ + S VVVPRNFRLLEELE+G+KG+GDGT+S+G++ DD+ + WTG IIGP T +
Sbjct: 3 LGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNVTVH 62
Query: 245 ENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLVDNRQVPILARWQRDYTIKTV 424
E R+Y LK+ CD YP++PPT RF SR+NM CVN +TG+VD ++ +LA WQR+YT++ +
Sbjct: 63 EGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDI 122
Query: 425 LQELRRLMTLKENMKLSQPPEGSTF 499
L +L++ M+ N KL QPPEG+ F
Sbjct: 123 LVQLKKEMSTSHNRKLVQPPEGTCF 147
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 177 bits (432), Expect = 3e-45
Identities = 73/142 (51%), Positives = 107/142 (75%)
Frame = +2
Query: 68 MANQSSGVVVPRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYE 247
M+++ + VVVPRNFRLLEELE+G+KG+GDGT+S+G++ DD+ + WTG I+GPP T YE
Sbjct: 1 MSSEEAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYE 60
Query: 248 NRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLVDNRQVPILARWQRDYTIKTVL 427
+++ LK+ C YP+ PPT RF +RINM CVN +TG+V+ P+L W+R+YT++ +L
Sbjct: 61 GKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDIL 120
Query: 428 QELRRLMTLKENMKLSQPPEGS 493
+L++ M N KL+QPPEG+
Sbjct: 121 VKLKKEMMTSHNRKLAQPPEGN 142
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 169 bits (410), Expect = 2e-42
Identities = 71/142 (50%), Positives = 104/142 (73%)
Frame = +2
Query: 68 MANQSSGVVVPRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYE 247
M ++ VVVPRNFRLLEELE+G+KG+GDGT+S+G++ DD+ + WTG I+GP T YE
Sbjct: 1 MGSEEEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYE 60
Query: 248 NRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLVDNRQVPILARWQRDYTIKTVL 427
+++ LK+ C YP+ PPT RF SRINM CVN + G+VD P+L+ W+R++T++ +L
Sbjct: 61 GKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLL 120
Query: 428 QELRRLMTLKENMKLSQPPEGS 493
+L++ M +N KL+QP EG+
Sbjct: 121 IQLKKEMMSSQNRKLAQPLEGN 142
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 53.2 bits (122), Expect = 1e-07
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Frame = +2
Query: 185 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLV 364
DD + WT +I GP TPYE ++ L YP +PP RF+++I V+ +TG +
Sbjct: 30 DDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEI 89
Query: 365 DNRQVPILAR-WQRDYTIKTVLQELRRLMTLKE 460
+ IL W +T+++V + + LM E
Sbjct: 90 ---CLDILKNAWSPAWTLQSVCRAIIALMAHPE 119
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 52.8 bits (121), Expect = 2e-07
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = +2
Query: 179 SDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRI-NMNCVNSQT 355
S D T + I GP T Y N +++LKI+ RYP +PP F + I + N NS
Sbjct: 38 SGDFSTFSTIDAQIEGPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGR 97
Query: 356 GLVDNRQVPILARWQRDYTIKTVLQELRRLMT 451
+D +P WQ I TVL +R L++
Sbjct: 98 ICLDILNLPPKGAWQPSLNISTVLTSMRLLLS 129
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 52.0 bits (119), Expect = 3e-07
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Frame = +2
Query: 110 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRY 289
R+ +EL+ ++ I +SD+ LT TG I GP TPYE + + I Y
Sbjct: 6 RIQKELQDCERNQDSSGIRVCPKSDN---LTRLTGTIPGPIGTPYEGGTFQIDITMPDGY 62
Query: 290 PDEPPTARFISRINMNCVNSQTGLVDNRQVPILA-RWQRDYTIKTVLQELRRLMTLKE 460
P EPP +F +++ ++SQ+G + + IL +W T+KT L ++ L++ E
Sbjct: 63 PFEPPKMQFSTKVWHPNISSQSGAI---CLDILKDQWSPALTLKTALVSIQALLSAPE 117
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 49.6 bits (113), Expect = 2e-06
Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Frame = +2
Query: 98 PRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIEC 277
P RL+ + ++ Q+ G IS G D+++ L W +I GP TP++ + L ++
Sbjct: 4 PARKRLMRDFKRLQQDPPAG-IS-GAPQDNNIML--WNAVIFGPDDTPWDGGTFKLSLQF 59
Query: 278 DTRYPDEPPTARFISRI-NMNCVNSQTGLVDNRQVPILARWQRDYTIKTVLQELRRLM 448
YP++PPT RF+SR+ + N + +D Q +W Y + +L ++ L+
Sbjct: 60 SEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ----NQWSPIYDVAAILTSIQSLL 113
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 49.6 bits (113), Expect = 2e-06
Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Frame = +2
Query: 98 PRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIEC 277
P RL+ + ++ Q+ G IS G D+++ L W +I GP TP++ + L ++
Sbjct: 4 PARKRLMRDFKRLQQDPPAG-IS-GAPQDNNIML--WNAVIFGPDDTPWDGGTFKLSLQF 59
Query: 278 DTRYPDEPPTARFISRI-NMNCVNSQTGLVDNRQVPILARWQRDYTIKTVLQELRRLM 448
YP++PPT RF+SR+ + N + +D Q +W Y + +L ++ L+
Sbjct: 60 SEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ----NQWSPIYDVAAILTSIQSLL 113
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 49.6 bits (113), Expect = 2e-06
Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Frame = +2
Query: 98 PRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIEC 277
P RL+ + ++ Q+ G IS G D+++ L W +I GP TP++ + L ++
Sbjct: 4 PARKRLMRDFKRLQQDPPAG-IS-GAPQDNNIML--WNAVIFGPDDTPWDGGTFKLSLQF 59
Query: 278 DTRYPDEPPTARFISRI-NMNCVNSQTGLVDNRQVPILARWQRDYTIKTVLQELRRLM 448
YP++PPT RF+SR+ + N + +D Q +W Y + +L ++ L+
Sbjct: 60 SEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ----NQWSPIYDVAAILTSIQSLL 113
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 48.8 bits (111), Expect = 3e-06
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 1/121 (0%)
Frame = +2
Query: 89 VVVPRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLK 268
+ P RL+ + ++ QK G IS G D++ + HW +I GP TP++ + L
Sbjct: 1 MTTPAKKRLMWDFKRLQKDPPVG-IS-GAPQDNN--IMHWNALIFGPEDTPWDGGTFKLT 56
Query: 269 IECDTRYPDEPPTARFISRI-NMNCVNSQTGLVDNRQVPILARWQRDYTIKTVLQELRRL 445
+ YP++PP RF+SR+ + N + +D Q +W Y + VL ++ L
Sbjct: 57 LHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDILQ----NQWSPIYDVAAVLTSIQSL 112
Query: 446 M 448
+
Sbjct: 113 L 113
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 47.6 bits (108), Expect = 6e-06
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Frame = +2
Query: 110 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRY 289
R+L+EL+ QK S G ++D + HW I+GPP +PY ++ + I Y
Sbjct: 5 RILKELKDLQKDP-PSNCSAGPVAED---MFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60
Query: 290 PDEPPTARFISRINMNCVNSQTGLVDNRQVPIL-ARWQRDYTIKTVLQELRRLMT 451
P +PP F +++ +NS + + IL +W TI VL + L+T
Sbjct: 61 PFKPPKVSFKTKVYHPNINSNGSIC----LDILKEQWSPALTISKVLLSICSLLT 111
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 47.2 bits (107), Expect = 8e-06
Identities = 34/89 (38%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = +2
Query: 197 LTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLVDNRQ 376
L HW IIGP TPYE ++ L I + YP +PP F +RI +C N T +
Sbjct: 65 LYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRI-YHC-NVDT--AGDLS 120
Query: 377 VPILA-RWQRDYTIKTVLQELRRLMTLKE 460
V IL W TI VLQ +R + E
Sbjct: 121 VNILRDSWSPALTITKVLQAIRSIFLKPE 149
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 46.8 bits (106), Expect = 1e-05
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Frame = +2
Query: 110 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRY 289
R+L+EL+ QK I G ++D + HW I+GP +PY ++ + I Y
Sbjct: 5 RILKELKDLQKDPPTSCIFAGPVAED---MFHWQATIMGPAESPYSGGVFLVTIHFPPDY 61
Query: 290 PDEPPTARFISRINMNCVNSQTGLVDNRQVPIL-ARWQRDYTIKTVLQELRRLMT 451
P +PP F +++ +NS + + IL +W TI VL + L+T
Sbjct: 62 PFKPPKVAFRTKVFHPNINSNGSIC----LDILKEQWSPALTISKVLLSICSLLT 112
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 45.2 bits (102), Expect = 3e-05
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 1/127 (0%)
Frame = +2
Query: 74 NQSSGVVVPRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENR 253
N G++ + R+L+EL+ QK + S G ++D + HW I+GP +PY
Sbjct: 23 NLDRGILEMASKRILKELKDLQKDPPT-SCSAGPVAED---MFHWQATIMGPSDSPYSGG 78
Query: 254 MYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLVDNRQVPIL-ARWQRDYTIKTVLQ 430
++ + I YP +PP F +++ +NS + + IL +W TI VL
Sbjct: 79 VFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSIC----LDILKEQWSPALTISKVLL 134
Query: 431 ELRRLMT 451
+ L+T
Sbjct: 135 SICSLLT 141
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 44.4 bits (100), Expect = 6e-05
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +2
Query: 206 WTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLVDN 370
WT +I GP TPYE M++L I+ T YP +PP F + I +N + + N
Sbjct: 39 WTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMN 93
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 43.6 bits (98), Expect = 1e-04
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Frame = +2
Query: 110 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRY 289
R+L+EL+ QK + S G ++D + HW I+GP +PY ++ + I Y
Sbjct: 5 RILKELKDLQKDPPT-SCSAGPVAED---MFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 290 PDEPPTARFISRINMNCVNSQTGLVDNRQVPIL-ARWQRDYTIKTVLQELRRLMT 451
P +PP F +++ +NS + + IL +W TI VL + L+T
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSIC----LDILKEQWSPALTISKVLLSICSLLT 111
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 43.6 bits (98), Expect = 1e-04
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Frame = +2
Query: 110 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRY 289
R+L+EL+ QK + S G ++D + HW I+GP +PY ++ + I Y
Sbjct: 5 RILKELKDLQKDPPT-SCSAGPVAED---MFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 290 PDEPPTARFISRINMNCVNSQTGLVDNRQVPIL-ARWQRDYTIKTVLQELRRLMT 451
P +PP F +++ +NS + + IL +W TI VL + L+T
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSIC----LDILKEQWSPALTISKVLLSICSLLT 111
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 43.2 bits (97), Expect = 1e-04
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Frame = +2
Query: 110 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRY 289
R+L+EL+ QK + S G ++D + HW I+GP +PY ++ + I Y
Sbjct: 5 RILKELKDLQKDPPT-SCSAGPVAED---MFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 290 PDEPPTARFISRINMNCVNSQTGLVDNRQVPIL-ARWQRDYTIKTVLQELRRLMT 451
P +PP F +++ +NS + + IL +W TI VL + L+T
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSIC----LDILKEQWSPALTISKVLLSICSLLT 111
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 43.2 bits (97), Expect = 1e-04
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Frame = +2
Query: 110 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRY 289
R+L+EL+ QK + S G ++D + HW I+GP +PY ++ + I Y
Sbjct: 5 RILKELKDLQKDPPT-SCSAGPVAED---MFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 290 PDEPPTARFISRINMNCVNSQTGLVDNRQVPIL-ARWQRDYTIKTVLQELRRLMT 451
P +PP F +++ +NS + + IL +W TI VL + L+T
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSIC----LDILKEQWSPALTISKVLLSICSLLT 111
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +2
Query: 185 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRI 328
D+ + W+ IIGPP T YE + + YP+ PPT RF S I
Sbjct: 30 DEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDI 77
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 43.2 bits (97), Expect = 1e-04
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Frame = +2
Query: 110 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRY 289
R+L+EL+ QK + S G ++D + HW I+GP +PY ++ + I Y
Sbjct: 5 RILKELKDLQKDPPT-SCSAGPVAED---MFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 290 PDEPPTARFISRINMNCVNSQTGLVDNRQVPIL-ARWQRDYTIKTVLQELRRLMT 451
P +PP F +++ VNS + + IL +W TI VL + L+T
Sbjct: 61 PFKPPKVAFRTKVFHPNVNSNGSIC----LDILKEQWSPALTISKVLLSICSLLT 111
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 42.7 bits (96), Expect = 2e-04
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Frame = +2
Query: 110 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRY 289
R+L+EL+ QK + S G ++D + HW I+GP +PY ++ + I Y
Sbjct: 5 RILKELKDLQKDPPT-SCSAGPVAED---MFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 290 PDEPPTARFISRINMNCVNSQTGLVDNRQVPIL-ARWQRDYTIKTVLQELRRLMT 451
P +PP F +++ +NS + + IL +W TI VL + L+T
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSIC----LDILKEQWSPALTISKVLLSICSLLT 111
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 42.3 bits (95), Expect = 2e-04
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +2
Query: 176 ESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFIS 322
+S D + W+ IIGPP T YE ++ + YP+ PPT RF S
Sbjct: 59 QSCDCYNIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTS 107
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 42.3 bits (95), Expect = 2e-04
Identities = 33/132 (25%), Positives = 58/132 (43%)
Frame = +2
Query: 68 MANQSSGVVVPRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYE 247
MA++ P R+L+E+++ Q D +S LE + + W I GP T +E
Sbjct: 1 MADERYNRKNPAVKRILQEVKEMQANPSDDFMSLPLEEN----IFEWQFAIRGPGDTEFE 56
Query: 248 NRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLVDNRQVPILARWQRDYTIKTVL 427
+Y +I+ YP +PP+ ++ N++ L + P WQ ++++T L
Sbjct: 57 GGIYHGRIQLPADYPFKPPSFMLLTPNGRFETNTKICLSISNYHP--EHWQPSWSVRTAL 114
Query: 428 QELRRLMTLKEN 463
L M N
Sbjct: 115 VALIAFMPTSPN 126
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 41.9 bits (94), Expect = 3e-04
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Frame = +2
Query: 110 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRY 289
R+L+EL++ Q+ + S G +D + HW I+GP +PY ++ + I Y
Sbjct: 5 RILKELKELQRDP-PVSCSAGPTGED---MFHWQATIMGPNESPYSGGVFLVNIHFPPDY 60
Query: 290 PDEPPTARFISRINMNCVNSQTGLVDNRQVPILA-RWQRDYTIKTVLQELRRLMT 451
P +PP F +++ +NS N + IL +W TI VL + L+T
Sbjct: 61 PFKPPKVVFRTKVFHPNINSN----GNICLDILKDQWSPALTISKVLLSICSLLT 111
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 41.1 bits (92), Expect = 5e-04
Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 1/114 (0%)
Frame = +2
Query: 110 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRY 289
RL EL G G G IS E D+ + W G I G T +E Y L + Y
Sbjct: 39 RLQSELMGLMMGGGPG-ISAFPEEDN---IFCWKGTITGSKDTVFEGTEYRLSLSFSNDY 94
Query: 290 PDEPPTARFISRINMNCVNSQTGLVDNRQVPILA-RWQRDYTIKTVLQELRRLM 448
P +PP +F C + + N + IL +W Y ++T+L ++ L+
Sbjct: 95 PFKPPKVKF----ETCCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLL 144
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/80 (30%), Positives = 41/80 (51%)
Frame = +2
Query: 110 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRY 289
R+L+EL+ QK + S G ++D + HW I+GP +PY ++ + I Y
Sbjct: 5 RILKELKDLQKDPPT-SCSAGPVAED---MFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 290 PDEPPTARFISRINMNCVNS 349
P +PP F +++ +NS
Sbjct: 61 PFKPPKVAFRTKVFHPNINS 80
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 39.9 bits (89), Expect = 0.001
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Frame = +2
Query: 110 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRY 289
R+ EL Q+ S G +++D + HW I+GP +PY ++++ I+ + Y
Sbjct: 5 RISRELRDMQRHP-PANCSAGPVAEED--IFHWQATIMGPHDSPYSGGVFTVSIDFSSDY 61
Query: 290 PDEPPTARFISRINMNCVNSQTGLVDNRQVPIL-ARWQRDYTIKTVLQELRRLMT 451
P +PP F +++ ++S+ + + IL +W T VL + L+T
Sbjct: 62 PFKPPKVNFKTKVYHPNIDSKGSIC----LDILKEQWSPAPTTSKVLLSICSLLT 112
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = +2
Query: 179 SDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTG 358
S+D+M ++ MI+GP ++PYE ++ L++ YP P RF+++I ++ + G
Sbjct: 30 SEDNMR--YFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID-KLG 86
Query: 359 LVDNRQVPILA-RWQRDYTIKTVLQELRRLMT 451
+ + IL +W I+TVL ++ L++
Sbjct: 87 RI---CLDILKDKWSPALQIRTVLLSIQALLS 115
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Frame = +2
Query: 179 SDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTG 358
S + + ++ MI+GP ++PYE ++ L++ YP P RF+++I ++ + G
Sbjct: 28 SPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID-KLG 86
Query: 359 LVDNRQVPILA-RWQRDYTIKTVLQELRRLMT 451
+ + IL +W I+TVL ++ L++
Sbjct: 87 RI---CLDILKDKWSPALQIRTVLLSIQALLS 115
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 38.7 bits (86), Expect = 0.003
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Frame = +2
Query: 110 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRY 289
RL +E ++ + SW L S ++ + W + GP PYE ++++ + +Y
Sbjct: 33 RLWKEFQEKDDVLKIHVRSW-LPSPEN--IFRWEATVNGPVGCPYEKGVFTVSVHIPPKY 89
Query: 290 PDEPPTARFISRINMNCVNSQTGLVDNRQVPIL-ARWQRDYTIKTVLQELRRLMT 451
P EPP F ++I + S+ G + V IL +RW TI VL + +++
Sbjct: 90 PYEPPKITFKTKIFHPNI-SEIGEI---FVDILGSRWSSALTINLVLLSICSILS 140
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +2
Query: 179 SDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRI 328
S+D+M ++ MI+GP ++PYE ++ L++ YP P RF+++I
Sbjct: 30 SEDNMR--YFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKI 77
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 38.3 bits (85), Expect = 0.004
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 185 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRI 328
D+ + W+ I+GPP T YE ++ + YP PPT F S +
Sbjct: 31 DEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEM 78
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 38.3 bits (85), Expect = 0.004
Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = +2
Query: 197 LTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLVDNRQ 376
+ ++ MI+GP ++PYE ++ L++ YP P RF+++I ++ + G +
Sbjct: 1 MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID-KLGRI---C 56
Query: 377 VPILA-RWQRDYTIKTVLQELRRLMT 451
+ IL +W I+TVL ++ L++
Sbjct: 57 LDILKDKWSPALQIRTVLLSIQALLS 82
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 37.5 bits (83), Expect = 0.007
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +2
Query: 206 WTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLVDNRQVPI 385
W G I G T +E Y L + YP + P +F C + L N + I
Sbjct: 68 WKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKF----ETCCFHPNVDLYGNICLDI 123
Query: 386 LA-RWQRDYTIKTVLQELRRLM 448
L +W Y ++T+L ++ L+
Sbjct: 124 LQDKWSSAYDVRTILLSIQSLL 145
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +2
Query: 197 LTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFIS 322
L WT + G P T Y N Y L++E YP E P F+S
Sbjct: 43 LQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFVS 84
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 35.9 bits (79), Expect = 0.020
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 218 IIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRI 328
I GP TPYEN ++ +K+ +P PP F+++I
Sbjct: 46 IEGPVGTPYENGLFRMKLALSHDFPHSPPKGYFMTKI 82
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 35.5 bits (78), Expect = 0.027
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +2
Query: 185 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLV 364
DDM W I+GP +P+ ++ + I YP +PP F +++ +NS +
Sbjct: 28 DDMF--QWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSIC 85
Query: 365 DNRQVPIL-ARWQRDYTIKTVLQELRRLMT 451
+ IL +W T+ VL + L+T
Sbjct: 86 ----LDILKEQWSPALTVSKVLLSICSLLT 111
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 35.5 bits (78), Expect = 0.027
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +2
Query: 185 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLV 364
DDM W I+GP +P+ ++ + I YP +PP F +++ +NS +
Sbjct: 28 DDMF--QWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSIC 85
Query: 365 DNRQVPIL-ARWQRDYTIKTVLQELRRLMT 451
+ IL +W T+ VL + L+T
Sbjct: 86 ----LDILKEQWSPALTVSKVLLSICSLLT 111
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 34.7 bits (76), Expect = 0.047
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2
Query: 197 LTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFI 319
L W + G P T Y N Y+L++E YP E P F+
Sbjct: 43 LQKWVIEVTGAPGTLYANETYNLQVEFPQHYPMEAPQVIFV 83
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 33.9 bits (74), Expect = 0.082
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +2
Query: 218 IIGPPRTPYENRMYSLKIECDTRYPDEPPTARFIS---RINMNCVNS 349
++G P TPY + ++ I +YP EPP + S R+N N S
Sbjct: 698 LVGAPGTPYHDGLFFFDIMLPPQYPHEPPMVHYHSGGMRLNPNLYES 744
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 33.9 bits (74), Expect = 0.082
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2
Query: 197 LTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFI 319
L W +IG P T Y N Y L+++ YP E P F+
Sbjct: 43 LQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPMESPQVIFL 83
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 32.3 bits (70), Expect = 0.25
Identities = 16/61 (26%), Positives = 33/61 (54%)
Frame = +2
Query: 182 DDDMTLTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGL 361
+DD+ + + T GP + Y+ ++ +K+E YP + P+ F+++I V+ +G
Sbjct: 26 NDDLQMFYVT--FHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGA 83
Query: 362 V 364
V
Sbjct: 84 V 84
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 32.3 bits (70), Expect = 0.25
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +2
Query: 215 MIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFIS---RINMNCVN 346
+IIG TPY + ++ I+ YP PP + S RIN N N
Sbjct: 306 VIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHSGGLRINPNLYN 352
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +2
Query: 215 MIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFIS---RINMNCVNSQTGLV 364
+IIG TPY + ++ I+ YP PP + S RIN N N LV
Sbjct: 952 VIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVYYHSGGLRINPNLYNCGKVLV 1004
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +2
Query: 215 MIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFIS---RINMN 337
+IIG TPY + ++ I+ YP PP + S RIN N
Sbjct: 640 VIIGAEGTPYHDGLFFFDIQFPDTYPSVPPKVHYHSGGLRINPN 683
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 31.9 bits (69), Expect = 0.33
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +2
Query: 197 LTHWTGMIIGPPRTPYENRMYSLKIECDTRYPDEPPTARF 316
L W + G P T Y N Y L++E YP E P F
Sbjct: 43 LQRWIIEVHGVPGTLYANETYQLQVEFPEHYPMEAPQVIF 82
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 31.5 bits (68), Expect = 0.44
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +2
Query: 224 GPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLV 364
GP + YE ++ +++E YP + P+ FI++I V+ +G V
Sbjct: 38 GPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSV 84
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 30.3 bits (65), Expect = 1.0
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +2
Query: 215 MIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFIS---RINMNCVN 346
+IIG TPY + ++ I YP PP + S RIN N N
Sbjct: 367 VIIGAQGTPYHDGLFFFDIFFPDTYPSTPPIVHYHSGGLRINPNLYN 413
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +2
Query: 224 GPPRTPYENRMYSLKIECDTRYPDEPPTARFISRINMNCVNSQTGLV 364
GP + Y+ ++ +++E YP + P+ FI++I V+ +G V
Sbjct: 38 GPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSV 84
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = +2
Query: 110 RLLEELEQGQKGVGDGTISWGLESDDD-MTLTHWTGMIIGPPRTPYENRMYSLKIECDTR 286
RL EE + +K G ++ D + L W I G T +E + L +
Sbjct: 9 RLAEERKSWRKNHPHGFVAKPETGQDGTVNLMVWHCTIPGKAGTDWEGGFFPLTMHFSED 68
Query: 287 YPDEPPTARF 316
YP +PP +F
Sbjct: 69 YPSKPPKCKF 78
>At2g41660.1 68415.m05147 expressed protein contains Pfam profile
PF04759: Protein of unknown function, DUF617
Length = 297
Score = 29.1 bits (62), Expect = 2.3
Identities = 22/74 (29%), Positives = 31/74 (41%)
Frame = -3
Query: 466 HVLLKCHETPKLL*NCLDSVITLPSCKDWNLPIINKSSLTVDTVHIDSRNKTSCRWLIRI 287
H + K H LL ++I +P+CK +LP SS +V I S R+
Sbjct: 70 HNIGKFHLKFSLLLRSFINIINIPACKMLSLPSPPSSSSSVSNQLISLVTGGSSSLGRRV 129
Query: 286 TSITFNFKRIHSIF 245
T + KR H F
Sbjct: 130 TGTLYGHKRGHVTF 143
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +2
Query: 215 MIIGPPRTPYENRMYSLKIECDTRYPDEPPTARFIS---RINMN 337
+I+G TPY++ ++ + YP PP+A + S R+N N
Sbjct: 885 VIVGAFGTPYQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPN 928
>At5g16590.1 68418.m01942 leucine-rich repeat transmembrane protein
kinase, putative
Length = 625
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 251 RMYSLKIECDTRYPDEPPTARFISRI 328
R+ ++ I C T+YPD PT ++R+
Sbjct: 584 RLLNIGISCTTQYPDSRPTMPEVTRL 609
>At2g31030.1 68415.m03783 oxysterol-binding family protein similar
to SWH1 [Saccharomyces cerevisiae] GI:402658; contains
Pfam profile PF01237: Oxysterol-binding protein
Length = 489
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +2
Query: 110 RLLEELEQGQKGVGDGTISWGLESDDDM 193
RL EE Q G D I+ G ESDDD+
Sbjct: 68 RLSEEYTQTNTGPDDDWITNGFESDDDV 95
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,020,423
Number of Sequences: 28952
Number of extensions: 229066
Number of successful extensions: 548
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 545
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1180950720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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