Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_C07
         (577 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    29   0.028
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    29   0.028
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   4.3  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   5.7  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   5.7  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   5.7  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   5.7  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    21   5.7  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.5  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   9.9  

>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 29.1 bits (62), Expect = 0.028
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -2

Query: 366 RTHTRQSSANARPKADRRGSQACPTSSHMRMHIG 265
           RTH+ +      P  DRR SQ+   ++HMR H G
Sbjct: 42  RTHSGEKPFRC-PVCDRRFSQSSSVTTHMRTHSG 74


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 29.1 bits (62), Expect = 0.028
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -2

Query: 366 RTHTRQSSANARPKADRRGSQACPTSSHMRMHIG 265
           RTH+ +      P  DRR SQ+   ++HMR H G
Sbjct: 298 RTHSGEKPFRC-PVCDRRFSQSSSVTTHMRTHSG 330


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = +3

Query: 81  HDRYRTSEKLPQSPVALIVRPALITHDLGGLLLQMSAT 194
           H  Y  + ++PQ       RP ++T    G     SAT
Sbjct: 27  HQHYGAAVQVPQGGRRRAARPGVVTTPRWGCARASSAT 64


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +2

Query: 245 PLLHNDKPMC 274
           P+LH+ +PMC
Sbjct: 104 PILHDTQPMC 113


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +2

Query: 245 PLLHNDKPMC 274
           P+LH+ +PMC
Sbjct: 104 PILHDTQPMC 113


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 370 SSHPHSPVKR*RSPESGPPRL 308
           S HP SP  +  +  S PP+L
Sbjct: 215 SEHPDSPNSKKSATPSPPPQL 235


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +2

Query: 245 PLLHNDKPMC 274
           P+LH+ +PMC
Sbjct: 104 PILHDTQPMC 113


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +2

Query: 245 PLLHNDKPMC 274
           P+LH+ +PMC
Sbjct: 104 PILHDTQPMC 113


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 342 RLTGECGCEESADTTSAPSCTKLSST 419
           +LTG+C   +S+DT    + + +S T
Sbjct: 765 QLTGQCVRNDSSDTNGKETRSIISVT 790


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 342 RLTGECGCEESADTTSAPSCTKLSST 419
           +LTG+C   +S+DT    + + +S T
Sbjct: 657 QLTGQCVRNDSSDTNGKETRSIISVT 682


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -1

Query: 415 EDNFVHEGADVVSADSSHPH 356
           +D F+H   D     S HPH
Sbjct: 334 KDAFIHRTVDDYFFCSPHPH 353


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,057
Number of Sequences: 336
Number of extensions: 2583
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)