Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_C04
         (526 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       24   0.94 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.7  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   8.8  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   8.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.8  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = +2

Query: 242 CSTGSTPGKDCHVTCNQLLTDDISVAATCAKKI 340
           C  G T GK CH   N    +      TC  KI
Sbjct: 56  CQPGFT-GKYCHENINDCKVNPCENGGTCVDKI 87


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +2

Query: 206  DYGLFQINDKYWCSTGSTPGK 268
            DY     +  YW   G+ PGK
Sbjct: 2538 DYFNANFSLNYWIEKGADPGK 2558


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 4   CRSTLYCSPFWHSLCIAMR 60
           CR   Y + + HSL I +R
Sbjct: 289 CRDCSYATKYCHSLKIHLR 307


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 4   CRSTLYCSPFWHSLCIAMR 60
           CR   Y + + HSL I +R
Sbjct: 47  CRDCSYATKYCHSLKIHLR 65


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +1

Query: 139 PCRERKRTVYRQNW 180
           PCR R++  +R+N+
Sbjct: 589 PCRPREQLTWRRNF 602


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +1

Query: 139 PCRERKRTVYRQNW 180
           PCR R++  +R+N+
Sbjct: 481 PCRPREQLTWRRNF 494


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,129
Number of Sequences: 336
Number of extensions: 2393
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12678017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)