Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_C03
         (540 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   4.0  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    21   5.2  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   5.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   6.9  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   6.9  

>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 448 LYKTTYCIVDGGYAGVCCDK 507
           LY     +  GGY+G  CD+
Sbjct: 117 LYHPQVLLSPGGYSGSLCDQ 136


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +1

Query: 4   PSPQLTADTSYQYQPLSIPQHFSMARPQLASFSSY 108
           P P +  ++S  Y PLS P     A    A  S++
Sbjct: 21  PYPSIGVESSAFYSPLSNPYALKDAGGTAADMSAW 55


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +2

Query: 140 VMMMTYLL*NGLVQRH*PHRSY*FLDFIHIIWKTIAGQKAC--*TSLVIAL 286
           V + +YLL +  VQR+  ++ Y  L  +  I+ T+     C   T LV+ L
Sbjct: 141 VFVTSYLLFDYFVQRNQEYKYYQILSHLSGIFFTVFNVAQCYLTTELVLML 191


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -2

Query: 533 LIINASTLALSQQT 492
           L+IN S + LSQQT
Sbjct: 274 LVINESIIDLSQQT 287


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 77  RDRNSLHSPRTLM 115
           RDR SLH P+  M
Sbjct: 93  RDRRSLHGPQQQM 105


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.133    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,068
Number of Sequences: 336
Number of extensions: 2344
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)