BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_C03
(540 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT010062-1|AAQ22531.1| 1145|Drosophila melanogaster LD15381p pro... 28 7.1
AY094738-1|AAM11091.1| 743|Drosophila melanogaster GH28796p pro... 28 7.1
AE014134-3324|AAF53950.2| 1145|Drosophila melanogaster CG9270-PA... 28 7.1
AE014134-3323|AAS64733.1| 1225|Drosophila melanogaster CG9270-PB... 28 7.1
AL132797-4|CAB60096.1| 1359|Drosophila melanogaster EG:BACN25G24... 28 9.4
AE014298-337|AAF45726.3| 1537|Drosophila melanogaster CG3895-PA ... 28 9.4
>BT010062-1|AAQ22531.1| 1145|Drosophila melanogaster LD15381p
protein.
Length = 1145
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 106 YADVSDRVEFESYDDDVPPVKWP 174
Y + EFES DD PP+ WP
Sbjct: 857 YRHLEAEGEFESPDDKKPPMNWP 879
>AY094738-1|AAM11091.1| 743|Drosophila melanogaster GH28796p
protein.
Length = 743
Score = 28.3 bits (60), Expect = 7.1
Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
Frame = +1
Query: 22 ADTSYQYQPLSIPQHFSMARPQLASFSSYADVSDRVEF---------ESYDDDVPPVKWP 174
A +S ++ P +IP S R + SY+D SD E E Y DD P
Sbjct: 149 AVSSPRFNPRNIPPTRSYRRISIELVGSYSDTSDSEEHELEEGTEHAEEYSDDAPEPHIA 208
Query: 175 SSTPLTTPVVLIPGLYTYHLEDYSWTESLLNFTSD 279
S ++ + G Y+ ED + TE + F D
Sbjct: 209 ESADDSSSNDDM-GPYSLSSEDETTTEDEVEFNED 242
>AE014134-3324|AAF53950.2| 1145|Drosophila melanogaster CG9270-PA,
isoform A protein.
Length = 1145
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 106 YADVSDRVEFESYDDDVPPVKWP 174
Y + EFES DD PP+ WP
Sbjct: 857 YRHLEAEGEFESPDDKKPPMNWP 879
>AE014134-3323|AAS64733.1| 1225|Drosophila melanogaster CG9270-PB,
isoform B protein.
Length = 1225
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 106 YADVSDRVEFESYDDDVPPVKWP 174
Y + EFES DD PP+ WP
Sbjct: 937 YRHLEAEGEFESPDDKKPPMNWP 959
>AL132797-4|CAB60096.1| 1359|Drosophila melanogaster
EG:BACN25G24.3,FBgn0004860;ph-d protein.
Length = 1359
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Frame = +1
Query: 70 SMARPQLASFSSYADVSDRVEFESYDDDVPPVKWP------SSTPLTTPVVL 207
+MA ++ + SY VSD + ++ +VPP+ P +S+PL+ P+ L
Sbjct: 1196 AMAEEKMQT-ESYQTVSDALPIQAATPEVPPISMPVLAAMSTSSPLSLPLTL 1246
>AE014298-337|AAF45726.3| 1537|Drosophila melanogaster CG3895-PA
protein.
Length = 1537
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Frame = +1
Query: 70 SMARPQLASFSSYADVSDRVEFESYDDDVPPVKWP------SSTPLTTPVVL 207
+MA ++ + SY VSD + ++ +VPP+ P +S+PL+ P+ L
Sbjct: 1374 AMAEEKMQT-ESYQTVSDALPIQAATPEVPPISMPVLAAMSTSSPLSLPLTL 1424
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.133 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,498,440
Number of Sequences: 53049
Number of extensions: 438636
Number of successful extensions: 1347
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1347
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2053700352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -