Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_C03
         (540 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   2.0  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   2.0  
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    23   2.6  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    23   2.6  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           21   8.1  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           21   8.1  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 82  PQLASFSSYADVSDRVEFESYDDDVPP 162
           PQ++  S+   +SD+  F+ +   VPP
Sbjct: 95  PQISPASTAKALSDKTRFDYFARTVPP 121


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 82  PQLASFSSYADVSDRVEFESYDDDVPP 162
           PQ++  S+   +SD+  F+ +   VPP
Sbjct: 185 PQISPASTAKALSDKTRFDYFARTVPP 211


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 261 QAFCPAIVFQMICIK 217
           Q FCP +V + +CIK
Sbjct: 51  QRFCPNVVPKPLCIK 65


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 261 QAFCPAIVFQMICIK 217
           Q FCP +V + +CIK
Sbjct: 51  QRFCPNVVPKPLCIK 65


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 154 RHHHNFQIQP 125
           RH +NFQ++P
Sbjct: 55  RHRYNFQLKP 64


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 154 RHHHNFQIQP 125
           RH +NFQ++P
Sbjct: 56  RHRYNFQLKP 65


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.133    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,426
Number of Sequences: 438
Number of extensions: 2966
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15336375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)