BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I09A02NGRL0002_C01 (578 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 04_03_0922 + 20834195-20836603 31 0.88 08_01_0663 + 5721902-5723176,5724162-5724233,5724405-5724560,572... 29 2.0 04_03_0916 + 20794240-20794246,20794585-20796545 29 2.0 04_03_0913 + 20777859-20780309 28 6.2 12_02_0244 - 16241243-16241279,16241781-16241848,16241930-162420... 27 8.2 09_03_0172 - 13072575-13073800,13075919-13076054 27 8.2 07_01_0646 + 4853546-4853623,4853732-4855357,4855467-4855751,485... 27 8.2 01_01_1208 + 9733010-9733114,9733920-9733979,9735254-9736280,973... 27 8.2 >04_03_0922 + 20834195-20836603 Length = 802 Score = 30.7 bits (66), Expect = 0.88 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Frame = +3 Query: 279 QPRFQCQSIRH*KPAKYSSSSELQHCRCRSGLHVQG-QDWCICDR 410 QP+ QC P + +EL C+C G ++ +DW + DR Sbjct: 290 QPKVQCDVFAVCGPFTICNDNELGFCKCMKGFSIKSPKDWELDDR 334 >08_01_0663 + 5721902-5723176,5724162-5724233,5724405-5724560, 5724655-5724844,5725173-5725255 Length = 591 Score = 29.5 bits (63), Expect = 2.0 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -3 Query: 384 LEHVVHSGTDSVEVRNLRNIWQVFSGECFGTEIVVVVME 268 LE + HSG + +V L N W ++ F + VV+V E Sbjct: 417 LELLAHSGEVNKQVPRLSNFWNMYFTHHFQVDTVVMVRE 455 >04_03_0916 + 20794240-20794246,20794585-20796545 Length = 655 Score = 29.5 bits (63), Expect = 2.0 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%) Frame = +3 Query: 279 QPRFQCQSIRH*KPAKYSSSSELQHCRCRSGLHVQG-QDWCICDR 410 QP+ QC P + +EL +C C G + +DW + DR Sbjct: 135 QPKAQCDVYSICGPFTVCTDNELPNCNCIKGFTITSLEDWVLEDR 179 >04_03_0913 + 20777859-20780309 Length = 816 Score = 27.9 bits (59), Expect = 6.2 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%) Frame = +3 Query: 279 QPRFQCQSIRH*KPAKYSSSSELQHCRCRSGLHVQG-QDWCICDR 410 QP+ C P +EL HC C G V +DW + DR Sbjct: 288 QPKAPCDVYAICGPFTVCIDNELPHCNCIKGFTVTSLEDWELEDR 332 >12_02_0244 - 16241243-16241279,16241781-16241848,16241930-16242032, 16242095-16242256,16242305-16242369,16242547-16242612, 16242738-16242829,16243029-16243134,16243231-16243279, 16243387-16243540,16243661-16243687,16243797-16243959, 16244621-16244701 Length = 390 Score = 27.5 bits (58), Expect = 8.2 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Frame = -3 Query: 402 RCTNLVLEHVVHSGTDSVEVRN--LRNIWQVFSGECF 298 R NLV+++V HSG + +++ LRN+ FS CF Sbjct: 354 RLQNLVMQNVDHSGGEFIDLLQGLLRNMLFGFSRICF 390 >09_03_0172 - 13072575-13073800,13075919-13076054 Length = 453 Score = 27.5 bits (58), Expect = 8.2 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = -3 Query: 450 QRVVITIKDIGVSGGRRCTNLVLEHVV 370 + V++T+KD+ GGR CT L E + Sbjct: 281 RNVILTMKDLTAVGGRFCTYLSKEKAI 307 >07_01_0646 + 4853546-4853623,4853732-4855357,4855467-4855751, 4856131-4856277 Length = 711 Score = 27.5 bits (58), Expect = 8.2 Identities = 18/58 (31%), Positives = 26/58 (44%) Frame = +1 Query: 25 AGALTVNSDGTSGAMVKVPITGNENHRLSALGSVDLTNQMKLGAATAGLAYDNVNGHG 198 AG + + G V + G +NH +S +G GA TAG AY+ +N G Sbjct: 178 AGHSSTSISAALGMAVARDLLGKKNHVISVIGD---------GAMTAGQAYEAMNNSG 226 >01_01_1208 + 9733010-9733114,9733920-9733979,9735254-9736280, 9736332-9736621 Length = 493 Score = 27.5 bits (58), Expect = 8.2 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Frame = -1 Query: 191 PFTLS*ANPAVAAPNFIWLVRSTEPRALSL*FSF-PVIGTLTIAPEVPSELTVSAPACRR 15 P TL +PA AA + IW +P + SF P + APE P L + A R Sbjct: 426 PKTLRIDDPAEAAKSSIWATLGIKPDDKGIFKSFQPNVAKNGTAPESPQALQANPAAFSR 485 Query: 14 N 12 + Sbjct: 486 S 486 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,634,860 Number of Sequences: 37544 Number of extensions: 397633 Number of successful extensions: 968 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 954 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 968 length of database: 14,793,348 effective HSP length: 78 effective length of database: 11,864,916 effective search space used: 1352600424 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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