BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I09A02NGRL0002_C01 (578 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AL117204-13|CAB55128.1| 286|Caenorhabditis elegans Hypothetical... 28 4.2 AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical... 28 5.5 Z49132-7|CAA88986.1| 403|Caenorhabditis elegans Hypothetical pr... 27 7.3 U53332-1|AAK31529.2| 580|Caenorhabditis elegans Hypothetical pr... 27 7.3 DQ178637-1|ABD75716.1| 580|Caenorhabditis elegans F59G1.4 protein. 27 7.3 Z99288-10|CAB16552.2| 338|Caenorhabditis elegans Hypothetical p... 27 9.6 Z82267-3|CAB05191.1| 186|Caenorhabditis elegans Hypothetical pr... 27 9.6 Z81483-7|CAB03964.2| 338|Caenorhabditis elegans Hypothetical pr... 27 9.6 AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 27 9.6 >AL117204-13|CAB55128.1| 286|Caenorhabditis elegans Hypothetical protein Y116A8C.22 protein. Length = 286 Score = 28.3 bits (60), Expect = 4.2 Identities = 13/28 (46%), Positives = 15/28 (53%) Frame = +3 Query: 30 CTNCQLRRHLRCYGQGTYNWKRKSQAQC 113 CT CQ HL+C G + W SQ QC Sbjct: 256 CTKCQKWVHLKCTGIRSKQW--NSQFQC 281 >AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical protein K04F10.7 protein. Length = 293 Score = 27.9 bits (59), Expect = 5.5 Identities = 12/36 (33%), Positives = 16/36 (44%) Frame = +3 Query: 291 QCQSIRH*KPAKYSSSSELQHCRCRSGLHVQGQDWC 398 QCQ + AKY Q+C+ + H Q WC Sbjct: 25 QCQKCQK-NEAKYGKPGTCQYCKLNAAFHDQKCVWC 59 >Z49132-7|CAA88986.1| 403|Caenorhabditis elegans Hypothetical protein ZK666.7 protein. Length = 403 Score = 27.5 bits (58), Expect = 7.3 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%) Frame = +1 Query: 130 LTNQMKLGAATAGLAY--DNVNGHGATLTKTHIPGF 231 L +MK+ A A +AY DNVNG L++ PG+ Sbjct: 180 LATRMKVDVAIATVAYGQDNVNGFLRQLSQIATPGY 215 >U53332-1|AAK31529.2| 580|Caenorhabditis elegans Hypothetical protein F59G1.4 protein. Length = 580 Score = 27.5 bits (58), Expect = 7.3 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = -3 Query: 561 LVLGSHEDFNERRIELLPTGVEVQRCGRSLE 469 L+ H++ + R+ L PT E +CG S E Sbjct: 309 LIAVVHQEVDYNRVPLTPTDGETDKCGSSCE 339 >DQ178637-1|ABD75716.1| 580|Caenorhabditis elegans F59G1.4 protein. Length = 580 Score = 27.5 bits (58), Expect = 7.3 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = -3 Query: 561 LVLGSHEDFNERRIELLPTGVEVQRCGRSLE 469 L+ H++ + R+ L PT E +CG S E Sbjct: 309 LIAVVHQEVDYNRVPLTPTDGETDKCGSSCE 339 >Z99288-10|CAB16552.2| 338|Caenorhabditis elegans Hypothetical protein ZK262.11 protein. Length = 338 Score = 27.1 bits (57), Expect = 9.6 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = -1 Query: 350 LKFGT*GIFGRFLVANALALK-SWLSLWKRFTLP 252 L+F T GI G F + K SW+ LWK+F P Sbjct: 108 LQFVTLGITGIFENRFRIICKFSWVPLWKKFITP 141 >Z82267-3|CAB05191.1| 186|Caenorhabditis elegans Hypothetical protein F38C2.5 protein. Length = 186 Score = 27.1 bits (57), Expect = 9.6 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = +1 Query: 322 PNIPQVPNFNTVGAGVDYMFKDKIGASATAAHTD 423 P +PQ ++ +G+ F D GASA+++ TD Sbjct: 151 PLMPQFSSWFAPSSGLSREFLDNFGASASSSSTD 184 >Z81483-7|CAB03964.2| 338|Caenorhabditis elegans Hypothetical protein C43D7.6 protein. Length = 338 Score = 27.1 bits (57), Expect = 9.6 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = -1 Query: 350 LKFGT*GIFGRFLVANALALK-SWLSLWKRFTLP 252 L+F T GI G F + K SW+ LWK+F P Sbjct: 108 LQFVTLGITGIFENRFRIICKFSWVPLWKKFITP 141 >AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical protein H20J04.4b protein. Length = 561 Score = 27.1 bits (57), Expect = 9.6 Identities = 15/39 (38%), Positives = 24/39 (61%) Frame = -3 Query: 576 LENEKLVLGSHEDFNERRIELLPTGVEVQRCGRSLEEIQ 460 LEN+K G ++ N R+ ELL +G++ R LEE++ Sbjct: 488 LENQKF--GEKKEINRRK-ELLMSGMDEDEADRHLEEMR 523 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,368,653 Number of Sequences: 27780 Number of extensions: 315941 Number of successful extensions: 724 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 701 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 724 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1205362812 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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