Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_B23
         (84 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    19   6.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    19   6.0  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    18   8.0  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 5/9 (55%), Positives = 6/9 (66%)
 Frame = +1

Query: 52   LFSCFFCTF 78
            LF C  CT+
Sbjct: 1084 LFKCMICTY 1092


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 5/9 (55%), Positives = 6/9 (66%)
 Frame = +1

Query: 52   LFSCFFCTF 78
            LF C  CT+
Sbjct: 1084 LFKCMICTY 1092


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory
          receptor candidate 48 protein.
          Length = 408

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 7/26 (26%), Positives = 12/26 (46%)
 Frame = +1

Query: 7  SSHQTQRVSTISGITLFSCFFCTFYI 84
          S+H  +    +  +  F+ F C F I
Sbjct: 13 STHSMKNFKYLKVLVTFAHFICLFPI 38


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,239
Number of Sequences: 336
Number of extensions: 151
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 9
effective length of database: 119,561
effective search space used:  2152098
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)