Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_B23
         (84 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                19   5.4  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    19   7.2  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    19   7.2  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    19   7.2  
AB006152-1|BAA24504.1|  178|Apis mellifera inositol 1,4,5-tripho...    19   7.2  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +1

Query: 1   HHSSHQTQ 24
           HH  HQTQ
Sbjct: 352 HHHHHQTQ 359


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -2

Query: 71  QKKQLNKVIPLIVDTR 24
           QKK  +KV+  ++D +
Sbjct: 82  QKKIADKVVQFLIDNK 97


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
          receptor protein.
          Length = 322

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 68 KKQLNKVIPLIVDTR 24
          K  L K  PL++DT+
Sbjct: 34 KPLLKKEYPLVMDTK 48


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -2

Query: 71  QKKQLNKVIPLIVDTR 24
           QKK  +KV+  ++D +
Sbjct: 82  QKKIADKVVQFLIDNK 97


>AB006152-1|BAA24504.1|  178|Apis mellifera inositol
          1,4,5-triphosphate recepter protein.
          Length = 178

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 68 KKQLNKVIPLIVDTR 24
          K  L K  PL++DT+
Sbjct: 2  KPLLKKEYPLVMDTK 16


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,946
Number of Sequences: 438
Number of extensions: 119
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 9
effective length of database: 142,401
effective search space used:  2563218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)