Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_B22
         (645 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   3.8  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   3.8  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   3.8  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   5.0  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   5.0  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   5.0  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    22   5.0  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 160 QIMRIVALQISRYVRRKRPALGQFTGLLG 246
           Q+M+  AL    +     PA+G  TG  G
Sbjct: 267 QVMKYAALATENFSSLLEPAVGTMTGAGG 295


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 390 SGSYPLFCLLRLLDGICTRHPS 325
           SG Y ++CLL LL  I   + S
Sbjct: 278 SGMYSMYCLLILLTTIVASYGS 299


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 390 SGSYPLFCLLRLLDGICTRHPS 325
           SG Y ++CLL LL  I   + S
Sbjct: 278 SGMYSMYCLLILLTTIVASYGS 299


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 515 LNDDYVIKVYFHPYIHSTERRPL 583
           L++ Y    Y+HP +HS    P+
Sbjct: 75  LSNGYGYGNYYHPQLHSHHGPPI 97


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 515 LNDDYVIKVYFHPYIHSTERRPL 583
           L++ Y    Y+HP +HS    P+
Sbjct: 75  LSNGYGYGNYYHPQLHSHHGPPI 97


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 515 LNDDYVIKVYFHPYIHSTERRPL 583
           L++ Y    Y+HP +HS    P+
Sbjct: 75  LSNGYGYGNYYHPQLHSHHGPPI 97


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 515 LNDDYVIKVYFHPYIHSTERRPL 583
           L++ Y    Y+HP +HS    P+
Sbjct: 75  LSNGYGYGNYYHPQLHSHHGPPI 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,932
Number of Sequences: 336
Number of extensions: 3620
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)