Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_B22
(645 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28928-12|AAL16320.2| 597|Caenorhabditis elegans Hypothetical p... 29 2.1
U41510-6|AAK39382.1| 454|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math ... 29 3.7
AC006630-8|AAK68330.1| 232|Caenorhabditis elegans Hypothetical ... 29 3.7
Z81556-1|CAB04524.1| 965|Caenorhabditis elegans Hypothetical pr... 28 4.9
U53149-1|AAD31546.1| 328|Caenorhabditis elegans Prion-like-(q/n... 28 6.5
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z72517-5|CAA96693.1| 545|Caenorhabditis elegans Hypothetical pr... 27 8.6
U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr... 27 8.6
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int... 27 8.6
>U28928-12|AAL16320.2| 597|Caenorhabditis elegans Hypothetical
protein C44B7.2a protein.
Length = 597
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 182 SATILIICSYRTP*SWDHSGGENARNKE 99
SA ++ +Y TP WD SGGE R +E
Sbjct: 500 SAPFIVKWAYATPRRWDGSGGEPPRYEE 527
>U41510-6|AAK39382.1| 454|Caenorhabditis elegans Hypothetical
protein ZC449.1 protein.
Length = 454
Score = 28.7 bits (61), Expect = 3.7
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +3
Query: 30 IHSFVFRLPAAPQSAIMNRSLIILLVSCVLAAAMVPRSRRSVTTNNENSSTANIKICAPQ 209
I++ F LP +P N + IL V L+ RR +TT +S T ++ C Q
Sbjct: 297 IYAEKFCLPESP-FVCQNDEIFILHVQKTLS------KRRRITTKAASSITDCLRKCLEQ 349
Query: 210 TPCAWSVYRPTGRIIDM-NITNNYCECASDSE 302
C SVY + ++ N+ + + A DS+
Sbjct: 350 DDCRSSVYISNSKKCELHNVDVSTGDYARDSD 381
>AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math
domain containingprotein 25 protein.
Length = 364
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 53 TGSTAVGNNESKFDNTPCFVRSRRRYGP 136
T ST + + KF N C V +RYGP
Sbjct: 2 TNSTRKFSLKQKFTNVSCMVNHEKRYGP 29
>AC006630-8|AAK68330.1| 232|Caenorhabditis elegans Hypothetical
protein F14H12.8 protein.
Length = 232
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -3
Query: 202 AHILIFAVLLFSLFVVTERLDLGTIAAARTHETRSI 95
AHI+IF V++ LFV ++ + A T + R+I
Sbjct: 118 AHIIIFFVVMIILFVFLSNINSSYVRRATTEKLRNI 153
>Z81556-1|CAB04524.1| 965|Caenorhabditis elegans Hypothetical
protein F58G1.1 protein.
Length = 965
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 174 SSTANIKICAPQTPCAWSVYRPTGRIIDMNITNNYCE 284
SSTA+ P P AW + G ++D +TN C+
Sbjct: 816 SSTASRHSAMPAAPKAWDLNIAPGILVDSIVTNPACK 852
>U53149-1|AAD31546.1| 328|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 16
protein.
Length = 328
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 261 NITNNYCECASDSECQYAEDDSTGVVYRCRPA 356
N N C+ S+ Q A+ TG V +C+PA
Sbjct: 269 NSCQNQCQAQQQSQQQCAQACQTGCVAQCQPA 300
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 27.9 bits (59), Expect = 6.5
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = -1
Query: 501 VTIIAYVIRKRGPLYTVC---VKNKRRHNISRNISVHACLSGSYPLFCLLRLLDGICTRH 331
+ + AYV +KRG V V ++ +SR S + SGS F L + D I R
Sbjct: 194 MVVSAYVSKKRGGKGLVLSDDVGSREDTPLSRASSTQSLASGSEQSFNLGNVPDKILRRV 253
Query: 330 PSNRPLHTGIR 298
S P+H IR
Sbjct: 254 ISFLPIHETIR 264
>Z72517-5|CAA96693.1| 545|Caenorhabditis elegans Hypothetical
protein T28F4.2 protein.
Length = 545
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +3
Query: 165 NENSSTANIKI---CAPQTPCAWSVYRPTGRIIDMNITNNYCECAS 293
N+ SST NI + C PC S Y PT + T+ Y +S
Sbjct: 350 NQTSSTPNIDLLVECNCNPPCDESTYTPTVSLAQFPSTSYYVATSS 395
>U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical
protein F57F4.4 protein.
Length = 2090
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +3
Query: 159 TNNENSSTANIKICAPQTPCAWSVYRPTGRIIDMNITNNYCECASDSEC 305
T N NS A + C P + CA R ID ++T C C +EC
Sbjct: 653 TVNNNSHYATLYTCDPSSACAAMGLRNNCSTIDNSLT--AC-CCDSNEC 698
>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
interacting proteinprotein 1 protein.
Length = 2153
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +3
Query: 159 TNNENSSTANIKICAPQTPCAWSVYRPTGRIIDMNITNNYCECASDSEC 305
T N NS A + C P + CA R ID ++T C C +EC
Sbjct: 653 TVNNNSHYATLYTCDPSSACAAMGLRNNCSTIDNSLT--AC-CCDSNEC 698
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,585,692
Number of Sequences: 27780
Number of extensions: 343154
Number of successful extensions: 948
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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