Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_B21
         (399 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    25   0.21 
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   1.5  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   4.5  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   4.5  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    21   5.9  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    20   7.8  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 25.4 bits (53), Expect = 0.21
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 276 ISDNQFHLLRILEPAVLEDACLHLI 202
           + DN FH LR L+   L+D  + +I
Sbjct: 57  VPDNSFHFLRSLKKVHLQDNTIEMI 81


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -3

Query: 286 LRHHIR*PVPSSPYP 242
           LR++   PVPS+PYP
Sbjct: 200 LRNYGPEPVPSTPYP 214


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +2

Query: 266 LSDMMSQASPDQSLDTCLIQVNQPIRI*SD 355
           +S   +  S D    TCLIQ+     I SD
Sbjct: 176 ISIAYTNVSTDAFFYTCLIQIETQCEIVSD 205


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +2

Query: 86  GTSEDSSRLSWCLMERARMTR*MKSGLSRAITDLTNATEIRC 211
           GTS  S+R +  L++R   TR   +  +   T  T     RC
Sbjct: 261 GTSSPSNRFTRHLIQRRTHTRHTTTSHNTRGTPRTTPASSRC 302


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 172 T*KSTFHSPCHACSFH 125
           T +ST    C AC +H
Sbjct: 27  TKRSTISQGCKACGYH 42


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 206 RCKHASSRTAGSRIRRRWNW 265
           +C       +GSR  RR NW
Sbjct: 65  KCLLVGMSKSGSRYGRRSNW 84


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,669
Number of Sequences: 336
Number of extensions: 2277
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8541369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)