Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_B18
         (424 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex det...    20   10.0 
DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex det...    20   10.0 
DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex det...    20   10.0 
DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex det...    20   10.0 
AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex det...    20   10.0 
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    20   10.0 
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    20   10.0 
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    20   10.0 
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    20   10.0 
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    20   10.0 

>DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex
          determiner protein.
          Length = 175

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 10 HNGKTQRREERQICHK*SR 66
          HN K +  EER  C + SR
Sbjct: 23 HNEKEKLLEERTSCKRYSR 41


>DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex
          determiner protein.
          Length = 175

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 10 HNGKTQRREERQICHK*SR 66
          HN K +  EER  C + SR
Sbjct: 23 HNEKEKLLEERTSCKRYSR 41


>DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex
          determiner protein.
          Length = 175

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 10 HNGKTQRREERQICHK*SR 66
          HN K +  EER  C + SR
Sbjct: 23 HNEKEKLLEERTSCKRYSR 41


>DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex
          determiner protein.
          Length = 175

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 10 HNGKTQRREERQICHK*SR 66
          HN K +  EER  C + SR
Sbjct: 23 HNEKEKLLEERTSCKRYSR 41


>AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 10  HNGKTQRREERQICHK*SR 66
           HN K +  EER  C + SR
Sbjct: 256 HNEKEKLLEERTSCKRYSR 274


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 10  HNGKTQRREERQICHK*SR 66
           HN K +  EER  C + SR
Sbjct: 256 HNEKEKLLEERTSCKRYSR 274


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 10  HNGKTQRREERQICHK*SR 66
           HN K +  EER  C + SR
Sbjct: 256 HNEKEKLLEERTSCKRYSR 274


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 10  HNGKTQRREERQICHK*SR 66
           HN K +  EER  C + SR
Sbjct: 256 HNEKEKLLEERTSCKRYSR 274


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 10  HNGKTQRREERQICHK*SR 66
           HN K +  EER  C + SR
Sbjct: 256 HNEKEKLLEERTSCKRYSR 274


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 10  HNGKTQRREERQICHK*SR 66
           HN K +  EER  C + SR
Sbjct: 245 HNEKEKLLEERTSCKRYSR 263


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,348
Number of Sequences: 438
Number of extensions: 2617
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10873896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)