Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_B16
         (499 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93380-2|CAB07596.1|  340|Caenorhabditis elegans Hypothetical pr...    31   0.35 
AF016432-3|AAK68168.1|  236|Caenorhabditis elegans Hypothetical ...    30   1.1  
Z70307-11|CAA94337.1|  488|Caenorhabditis elegans Hypothetical p...    29   1.4  
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ...    29   1.4  
Z82284-1|CAB05287.1|  226|Caenorhabditis elegans Hypothetical pr...    29   1.9  
AF036701-5|AAB88367.1|  125|Caenorhabditis elegans Hypothetical ...    29   1.9  
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr...    29   2.5  
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ...    29   2.5  
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.      29   2.5  
Z70756-7|CAA94794.2|  199|Caenorhabditis elegans Hypothetical pr...    28   3.3  
AF003389-1|AAC71138.2|  865|Caenorhabditis elegans Hypothetical ...    28   3.3  
Z81054-9|CAB02883.2|  540|Caenorhabditis elegans Hypothetical pr...    27   5.7  
Z70756-8|CAA94795.2|  212|Caenorhabditis elegans Hypothetical pr...    27   5.7  
U14635-11|AAK84494.2|  500|Caenorhabditis elegans Glutamate-gate...    27   7.6  
AL032627-8|CAB63354.2|  373|Caenorhabditis elegans Hypothetical ...    27   7.6  
Z75711-8|CAJ43907.1|  118|Caenorhabditis elegans Hypothetical pr...    27   10.0 
U29614-6|AAA68809.2|  378|Caenorhabditis elegans Hypothetical pr...    27   10.0 
AF003141-14|AAM48549.1|  362|Caenorhabditis elegans Hypothetical...    27   10.0 
AF003141-13|AAK21490.1|  549|Caenorhabditis elegans Hypothetical...    27   10.0 

>Z93380-2|CAB07596.1|  340|Caenorhabditis elegans Hypothetical
           protein F28C12.2 protein.
          Length = 340

 Score = 31.5 bits (68), Expect = 0.35
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
 Frame = +1

Query: 70  IITLIIIQARFTWWTIVVYHRTAIV---TTLFLRTRILSSLIHQTVLAE 207
           IIT+++I   FTW  I    +  I    T L L   +L+S++HQT + E
Sbjct: 34  IITVVLISYCFTWLAIQALWKHNIFSNSTRLILIVCLLNSVVHQTTMLE 82


>AF016432-3|AAK68168.1|  236|Caenorhabditis elegans Hypothetical
           protein C07G3.10 protein.
          Length = 236

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -3

Query: 161 RKNNVVTIAVRWYTTIVHHVNLAWIIIRVMIDHVHSVYDSHGQYGE 24
           +K  VV+    W+   +   N    I+ V+ +H+ SV+D    Y E
Sbjct: 73  QKGEVVSFLSNWFQDRIQRPNTTTEIVSVLREHLPSVFDKIHSYNE 118


>Z70307-11|CAA94337.1|  488|Caenorhabditis elegans Hypothetical
           protein C39E9.10 protein.
          Length = 488

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
 Frame = +1

Query: 58  CTWSIITLIIIQARFTWW-TIVVYHRTA 138
           CTW    L+ +    +WW   V+ H TA
Sbjct: 229 CTWGYTALVFVSGTLSWWEPTVIQHLTA 256


>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
            protein F39C12.1 protein.
          Length = 5105

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = -2

Query: 126  VHHYCPPREPGLDYNQGYDRPR--ALCLRQPWPIR 28
            VHH   PR   LD     D P   + C+++PWP +
Sbjct: 1648 VHHIGIPRRASLDQFYRKDLPATCSACIKEPWPTK 1682


>Z82284-1|CAB05287.1|  226|Caenorhabditis elegans Hypothetical
           protein T27E7.1 protein.
          Length = 226

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = +3

Query: 189 SNGP-SGNYEPISTGPAFVDFYHPNYPPERYDYPLARGGKYMSHTD 323
           +NGP SG+++  ST P     Y   Y P+ Y Y   +GGKYM H D
Sbjct: 64  NNGPGSGSFK--STKPPRGLVY---YQPKNYPYKPGKGGKYM-HAD 103


>AF036701-5|AAB88367.1|  125|Caenorhabditis elegans Hypothetical
           protein ZC416.2 protein.
          Length = 125

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +3

Query: 159 ANPDPFFSHPSNGPSGNYEPISTGPAFVDFYHPNYP 266
           A P P++ + +  P G+    + GP    +Y+PN P
Sbjct: 10  AQPQPYYGNANYAPQGSNPYPAQGPYPQGYYNPNQP 45


>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical
           protein Y76A2B.1 protein.
          Length = 1057

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
 Frame = +3

Query: 57  VHVVDHNPDYNPGQVHVVDNSGVPSDGNSDHVVLANPDPF-FSHPSNGPSGN--YEPIST 227
           V  +D+ P      VH  +     + GNS  +   +P+P     P++ P+ +    P   
Sbjct: 452 VRELDYRPYEKENGVHTPNAETNSTQGNSSPISTISPEPVTIVKPASTPATDSVSTPSVV 511

Query: 228 GPAFVDFYHPNYPPERYDYPLARGGK 305
           GPAF     P  PP  +  P+    +
Sbjct: 512 GPAFGKKV-PEQPPVNFRKPIGASNR 536


>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
           protein Y76A2B.1 protein.
          Length = 1057

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
 Frame = +3

Query: 57  VHVVDHNPDYNPGQVHVVDNSGVPSDGNSDHVVLANPDPF-FSHPSNGPSGN--YEPIST 227
           V  +D+ P      VH  +     + GNS  +   +P+P     P++ P+ +    P   
Sbjct: 452 VRELDYRPYEKENGVHTPNAETNSTQGNSSPISTISPEPVTIVKPASTPATDSVSTPSVV 511

Query: 228 GPAFVDFYHPNYPPERYDYPLARGGK 305
           GPAF     P  PP  +  P+    +
Sbjct: 512 GPAFGKKV-PEQPPVNFRKPIGASNR 536


>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
          Length = 1057

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
 Frame = +3

Query: 57  VHVVDHNPDYNPGQVHVVDNSGVPSDGNSDHVVLANPDPF-FSHPSNGPSGN--YEPIST 227
           V  +D+ P      VH  +     + GNS  +   +P+P     P++ P+ +    P   
Sbjct: 452 VRELDYRPYEKENGVHTPNAETNSTQGNSSPISTISPEPVTIVKPASTPATDSVSTPSVV 511

Query: 228 GPAFVDFYHPNYPPERYDYPLARGGK 305
           GPAF     P  PP  +  P+    +
Sbjct: 512 GPAFGKKV-PEQPPVNFRKPIGASNR 536


>Z70756-7|CAA94794.2|  199|Caenorhabditis elegans Hypothetical
           protein T06E4.8 protein.
          Length = 199

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +3

Query: 153 VLANPDPFFSHPSNGPSGNYEPISTGPAF 239
           V A P P F+ P+  P     PI  GPAF
Sbjct: 110 VFAAPRPVFASPALAPVAPMAPILRGPAF 138


>AF003389-1|AAC71138.2|  865|Caenorhabditis elegans Hypothetical
           protein F23H11.2 protein.
          Length = 865

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 11/47 (23%), Positives = 29/47 (61%)
 Frame = -3

Query: 287 RVVVSLGWIIGMIEIDERRSSAYGFIISARTV*WMREERIRVRKNNV 147
           +++++L  ++ ++      SS Y  I+++  V W+RE+R R+ + ++
Sbjct: 288 QLILNLEMLVAILH-SALMSSGYQTILTSDVVRWIREDRFRISRRSI 333


>Z81054-9|CAB02883.2|  540|Caenorhabditis elegans Hypothetical
           protein F01D4.1 protein.
          Length = 540

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +3

Query: 351 LLIL*YFPNFNLVMHLYSYFLF 416
           LLI+ YF  F LV H+YSYF +
Sbjct: 513 LLIVAYFAKF-LVSHVYSYFCY 533


>Z70756-8|CAA94795.2|  212|Caenorhabditis elegans Hypothetical
           protein T06E4.9 protein.
          Length = 212

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 153 VLANPDPFFSHPSNGPSGNYEPISTGPAF 239
           V A P P F+ P+  P     P+  GPAF
Sbjct: 123 VFAAPRPVFAAPALAPVAPMAPVLRGPAF 151


>U14635-11|AAK84494.2|  500|Caenorhabditis elegans Glutamate-gated
           chloride channelprotein 4 protein.
          Length = 500

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +3

Query: 12  VFIFFAVLAMAVVNRVHVVDHN 77
           VFIFF+++  AVVN V ++D +
Sbjct: 336 VFIFFSLIEYAVVNYVGILDEH 357


>AL032627-8|CAB63354.2|  373|Caenorhabditis elegans Hypothetical
           protein Y41C4A.5 protein.
          Length = 373

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
 Frame = +3

Query: 114 NSGVPSDGNSDHVVLANPDPFFSHPSNGPSGNYEPISTGPAFV-DFYHPNYP-PERYDYP 287
           N    S+GN+ +    N +    + +NG +GN  P    P     +Y P YP P  Y YP
Sbjct: 253 NGNGNSNGNNGNGSNGNGNGNNGNGNNGNNGNGHPQYPYPVPPHGYYPPGYPYPPGYPYP 312


>Z75711-8|CAJ43907.1|  118|Caenorhabditis elegans Hypothetical
           protein K02B12.9 protein.
          Length = 118

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 23/90 (25%), Positives = 33/90 (36%), Gaps = 5/90 (5%)
 Frame = +3

Query: 15  FIFFAVLAMAVVNRVHVVDHNPDYNPGQVHVV----DNSGVPSDGNSDHVVLANPDPFFS 182
           F  F VL +     + + DH P Y   Q   V      S   S G  D    ++  P + 
Sbjct: 3   FRLFLVLVICATTALAMFDHGPKYGSHQFKPVYLSPYGSKYESYGKYDDHKDSHYQPSYY 62

Query: 183 HPSNGPSGNY-EPISTGPAFVDFYHPNYPP 269
           H S  P  N      +G  +   Y P++ P
Sbjct: 63  HDSYEPKYNSGHDQKSGNDYYSSYQPSHQP 92


>U29614-6|AAA68809.2|  378|Caenorhabditis elegans Hypothetical
           protein F18E9.3 protein.
          Length = 378

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = +3

Query: 6   AFVFIFFAVLAMAVVNRVHVVDHNPDYNPGQVHVVDNSGVPSDGNSDH 149
           AF+ +F  VL   V  +  V+   P +  G + +VD + + +  + D+
Sbjct: 7   AFISLFPIVLCEKVKRQEQVIHEIPKFKRGPIVIVDETALTNPNSFDY 54


>AF003141-14|AAM48549.1|  362|Caenorhabditis elegans Hypothetical
           protein W02D3.11b protein.
          Length = 362

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +3

Query: 129 SDGNSDHVVLANPDPFFSHPSNGPSGNYEPIS 224
           ++ N   V    P PF S P   P G Y+P S
Sbjct: 207 AEENDLRVPRFGPPPFASAPQTAPRGAYDPYS 238


>AF003141-13|AAK21490.1|  549|Caenorhabditis elegans Hypothetical
           protein W02D3.11a protein.
          Length = 549

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +3

Query: 129 SDGNSDHVVLANPDPFFSHPSNGPSGNYEPIS 224
           ++ N   V    P PF S P   P G Y+P S
Sbjct: 207 AEENDLRVPRFGPPPFASAPQTAPRGAYDPYS 238


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,784,390
Number of Sequences: 27780
Number of extensions: 244681
Number of successful extensions: 735
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 735
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)