Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_B16
         (499 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   2.3  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   4.1  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   7.1  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   7.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   7.1  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 9/17 (52%), Positives = 11/17 (64%), Gaps = 2/17 (11%)
 Frame = +2

Query: 275 IRLPSRPWWEVY--VSY 319
           I +  RPWWE Y  +SY
Sbjct: 69  IVIDKRPWWERYQPISY 85


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +3

Query: 177  FSHPSNGPSGNYEP 218
            F HP NG SG   P
Sbjct: 1748 FPHPGNGHSGTMGP 1761


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 339 SFKIANQYETYTSHHGREG 283
           +F   N Y+++   HG+EG
Sbjct: 70  AFDQKNLYQSHLRSHGKEG 88


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 240 VDFYHPNYPPERYDYPLARGGKYMS 314
           V+FY  N   E++   L RGGK ++
Sbjct: 306 VNFYPNNQDIEKFLNYLKRGGKTLT 330


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +3

Query: 54  RVHVVDHNPDYNPGQVHV 107
           R + +  +PD + GQ+H+
Sbjct: 897 RFYSISSSPDVHQGQIHL 914


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,829
Number of Sequences: 438
Number of extensions: 3357
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)