Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_B15
         (625 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z32517-1|CAA83532.1|  574|Homo sapiens glutamate transporter pro...    31   4.4  
U03505-1|AAA50429.1|  574|Homo sapiens excitatory amino acid tra...    31   4.4  
D85884-1|BAA28706.1|  574|Homo sapiens glutamate transporter pro...    31   4.4  
BC132768-1|AAI32769.1|  574|Homo sapiens solute carrier family 1...    31   4.4  
AY066021-1|AAL57716.1|  574|Homo sapiens excitotoxic amino acid ...    31   4.4  
AL133330-2|CAM28291.1|  574|Homo sapiens solute carrier family 1...    31   4.4  
AL133330-1|CAM28290.1|  565|Homo sapiens solute carrier family 1...    31   4.4  
AB209444-1|BAD92681.1|  576|Homo sapiens solute carrier family 1...    31   4.4  

>Z32517-1|CAA83532.1|  574|Homo sapiens glutamate transporter
           protein.
          Length = 574

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 66  TLVVFIALTAVACGSLVPLAQPLHNSAVVL 155
           TL VF  +    CG L+ LA P+H   V+L
Sbjct: 48  TLTVFGVILGAVCGGLLRLASPIHPDVVML 77


>U03505-1|AAA50429.1|  574|Homo sapiens excitatory amino acid
           transporter2 protein.
          Length = 574

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 66  TLVVFIALTAVACGSLVPLAQPLHNSAVVL 155
           TL VF  +    CG L+ LA P+H   V+L
Sbjct: 48  TLTVFGVILGAVCGGLLRLASPIHPDVVML 77


>D85884-1|BAA28706.1|  574|Homo sapiens glutamate transporter
           protein.
          Length = 574

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 66  TLVVFIALTAVACGSLVPLAQPLHNSAVVL 155
           TL VF  +    CG L+ LA P+H   V+L
Sbjct: 48  TLTVFGVILGAVCGGLLRLASPIHPDVVML 77


>BC132768-1|AAI32769.1|  574|Homo sapiens solute carrier family 1
           (glial high affinity glutamate transporter), member 2
           protein.
          Length = 574

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 66  TLVVFIALTAVACGSLVPLAQPLHNSAVVL 155
           TL VF  +    CG L+ LA P+H   V+L
Sbjct: 48  TLTVFGVILGAVCGGLLRLASPIHPDVVML 77


>AY066021-1|AAL57716.1|  574|Homo sapiens excitotoxic amino acid
           transporter 2 protein.
          Length = 574

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 66  TLVVFIALTAVACGSLVPLAQPLHNSAVVL 155
           TL VF  +    CG L+ LA P+H   V+L
Sbjct: 48  TLTVFGVILGAVCGGLLRLASPIHPDVVML 77


>AL133330-2|CAM28291.1|  574|Homo sapiens solute carrier family 1
           (glial high affinity glutamate transporter), member 2
           protein.
          Length = 574

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 66  TLVVFIALTAVACGSLVPLAQPLHNSAVVL 155
           TL VF  +    CG L+ LA P+H   V+L
Sbjct: 48  TLTVFGVILGAVCGGLLRLASPIHPDVVML 77


>AL133330-1|CAM28290.1|  565|Homo sapiens solute carrier family 1
           (glial high affinity glutamate transporter), member 2
           protein.
          Length = 565

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 66  TLVVFIALTAVACGSLVPLAQPLHNSAVVL 155
           TL VF  +    CG L+ LA P+H   V+L
Sbjct: 39  TLTVFGVILGAVCGGLLRLASPIHPDVVML 68


>AB209444-1|BAD92681.1|  576|Homo sapiens solute carrier family 1,
           member 2 variant protein.
          Length = 576

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 66  TLVVFIALTAVACGSLVPLAQPLHNSAVVL 155
           TL VF  +    CG L+ LA P+H   V+L
Sbjct: 50  TLTVFGVILGAVCGGLLRLASPIHPDVVML 79


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,275,968
Number of Sequences: 237096
Number of extensions: 1505423
Number of successful extensions: 6344
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6344
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)