Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_B15
         (625 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70756-10|CAI46587.1|  228|Caenorhabditis elegans Hypothetical p...    31   0.88 
AF490977-1|AAQ06435.1|  801|Caenorhabditis elegans ABC6 protein ...    30   1.2  
Z82078-7|CAB04947.3|  801|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z70756-12|CAA94796.2|  180|Caenorhabditis elegans Hypothetical p...    29   2.7  
AF497514-1|AAM33381.1|  801|Caenorhabditis elegans heavy metal t...    29   2.7  
AF497513-1|AAM33380.1|  801|Caenorhabditis elegans heavy metal t...    29   2.7  
Z70310-5|CAA94369.1| 1141|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr...    27   8.2  
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr...    27   8.2  

>Z70756-10|CAI46587.1|  228|Caenorhabditis elegans Hypothetical
           protein T06E4.12 protein.
          Length = 228

 Score = 30.7 bits (66), Expect = 0.88
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +3

Query: 258 VVAPVTYSVAAPISYSAPTIYAAPA 332
           V+AP    VAAP+  +APT+ AAPA
Sbjct: 43  VLAPGVAPVAAPVLAAAPTVLAAPA 67


>AF490977-1|AAQ06435.1|  801|Caenorhabditis elegans ABC6 protein
           protein.
          Length = 801

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 196 MLALCTFKLKLWNLTLLTFMRWLHQ 270
           +LA C  KL  W L+L +F++W +Q
Sbjct: 103 LLAFCVSKLFFWILSLCSFLKWRNQ 127


>Z82078-7|CAB04947.3|  801|Caenorhabditis elegans Hypothetical
           protein W09D6.6 protein.
          Length = 801

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +1

Query: 196 MLALCTFKLKLWNLTLLTFMRWLHQ 270
           +LA C  KL  W L+L +F +W +Q
Sbjct: 103 LLAFCVSKLFFWILSLCSFSKWRNQ 127


>Z70756-12|CAA94796.2|  180|Caenorhabditis elegans Hypothetical
           protein T06E4.10 protein.
          Length = 180

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 27/92 (29%), Positives = 37/92 (40%), Gaps = 1/92 (1%)
 Frame = +3

Query: 60  MKTLVVFIALTAVACGSLVPLAQPLHNSAVVLDIHGRPLDTADVINARAVHLQAKALELD 239
           MK++ +F AL AV+   L       ++        G          A A    A AL   
Sbjct: 1   MKSVAIFCALFAVSTAQLAAWPSTSYSPFYQALFGGAAAPAVAAAPAFAAPAYAPALGAP 60

Query: 240 ASHVHAVVAPV-TYSVAAPISYSAPTIYAAPA 332
           A +  A+ AP     +AAP    AP + AAPA
Sbjct: 61  A-YAPALAAPAYAPGLAAPAFAPAPVVAAAPA 91


>AF497514-1|AAM33381.1|  801|Caenorhabditis elegans heavy metal
           tolerance factor 1 protein.
          Length = 801

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +1

Query: 196 MLALCTFKLKLWNLTLLTFMRWLHQ 270
           +LA C  KL  W L+L +F +W +Q
Sbjct: 103 LLAFCVSKLFFWILSLCSFSKWRNQ 127


>AF497513-1|AAM33380.1|  801|Caenorhabditis elegans heavy metal
           tolerance factor 1 protein.
          Length = 801

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +1

Query: 196 MLALCTFKLKLWNLTLLTFMRWLHQ 270
           +LA C  KL  W L+L +F +W +Q
Sbjct: 103 LLAFCVSKLFFWILSLCSFSKWRNQ 127


>Z70310-5|CAA94369.1| 1141|Caenorhabditis elegans Hypothetical protein
            R11A8.6 protein.
          Length = 1141

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +3

Query: 216  QAKALELDASHVHAVVAPVTYSVAAPISYSAPTIYAA 326
            QAK +  D +HVH VV+P    +A  ++     I +A
Sbjct: 992  QAKLVSTDTAHVHIVVSPADSQLAKVVAAKLNDIVSA 1028


>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical protein
            ZC116.3 protein.
          Length = 3871

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = +2

Query: 56   HNENAGGVYCFNRCGLWLPGAVSPTTS*LRSSFGHSRQTAGYG 184
            HNE   G      CG  +P ++  TT+ +   F   R  AG G
Sbjct: 1018 HNETVHGELLGKFCGAMIPPSIYSTTNTMAVVFVSDRSVAGPG 1060


>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical protein
            ZC116.3 protein.
          Length = 3871

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = +2

Query: 56   HNENAGGVYCFNRCGLWLPGAVSPTTS*LRSSFGHSRQTAGYG 184
            HNE   G      CG  +P ++  TT+ +   F   R  AG G
Sbjct: 1018 HNETVHGELLGKFCGAMIPPSIYSTTNTMAVVFVSDRSVAGPG 1060


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,656,397
Number of Sequences: 27780
Number of extensions: 235094
Number of successful extensions: 634
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)