Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_B15
         (625 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    24   1.4  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    24   1.4  
AY340960-1|AAQ16586.1|   78|Apis mellifera apisimin precursor pr...    23   1.8  
AY055108-1|AAL15544.1|   78|Apis mellifera apisimin precursor pr...    23   1.8  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    22   5.6  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    22   5.6  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   7.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   7.4  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    21   9.8  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   9.8  
AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.           21   9.8  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   9.8  
AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.             21   9.8  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 483 AAYAIAPAAVSEQSRVDVISEPAVVTHSVATPLV 584
           +A+AIAPA +S    V  ++   ++ H   TP+V
Sbjct: 513 SAFAIAPAVISCLGIVATMAVACLLFHHRDTPVV 546


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 483 AAYAIAPAAVSEQSRVDVISEPAVVTHSVATPLV 584
           +A+AIAPA +S    V  ++   ++ H   TP+V
Sbjct: 603 SAFAIAPAVISCLGIVATMAVACLLFHHRDTPVV 636


>AY340960-1|AAQ16586.1|   78|Apis mellifera apisimin precursor
           protein.
          Length = 78

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +3

Query: 480 LAAYAIAPAA--VSEQSRVDVISEPAVVTHSVATPLVSHLISGSDYCCV 620
           LAA+ +A     VS ++ + V  E  V   S    LVS ++SG++   V
Sbjct: 10  LAAFCVAMLVSDVSAKTSISVKGESNVDVVSQINSLVSSIVSGANVSAV 58


>AY055108-1|AAL15544.1|   78|Apis mellifera apisimin precursor
           protein.
          Length = 78

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +3

Query: 480 LAAYAIAPAA--VSEQSRVDVISEPAVVTHSVATPLVSHLISGSDYCCV 620
           LAA+ +A     VS ++ + V  E  V   S    LVS ++SG++   V
Sbjct: 10  LAAFCVAMLVSDVSAKTSISVKGESNVDVVSQINSLVSSIVSGANVSAV 58


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -3

Query: 536 DIYTRLF*YGSWSYSIRSKRTFLQQMSV 453
           ++Y R+F  GS  YSIR   T    M++
Sbjct: 137 NVYIRIFPNGSVLYSIRISLTLSCPMNL 164


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -3

Query: 536 DIYTRLF*YGSWSYSIRSKRTFLQQMSV 453
           ++Y R+F  GS  YSIR   T    M++
Sbjct: 137 NVYIRIFPNGSVLYSIRISLTLSCPMNL 164


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = -3

Query: 254 MNVRSVKFQSFSLKVHSASIDHISRIQRSAVNVQNYCGVM 135
           + +  VKF+S ++       D    +  +AV V+N+ G M
Sbjct: 446 LQMPGVKFESVNIDKLYTYFDKCDTLINNAVAVENFKGGM 485


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = -3

Query: 254 MNVRSVKFQSFSLKVHSASIDHISRIQRSAVNVQNYCGVM 135
           + +  VKF+S ++       D    +  +AV V+N+ G M
Sbjct: 446 LQMPGVKFESVNIDKLYTYFDKCDTLINNAVAVENFKGGM 485


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
          precursor protein.
          Length = 95

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 5/8 (62%), Positives = 8/8 (100%)
 Frame = -3

Query: 62 HCERGLCL 39
          HCE+G+C+
Sbjct: 73 HCEKGVCI 80


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 79  NTTSVFIVNVVCVWI 35
           NTT++F+    C WI
Sbjct: 224 NTTTIFVPVKPCPWI 238


>AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.
          Length = 57

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 5/8 (62%), Positives = 8/8 (100%)
 Frame = -3

Query: 62 HCERGLCL 39
          HCE+G+C+
Sbjct: 48 HCEKGVCI 55


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 3   INGSKLSYFCRIQTQT 50
           ING + S FC +Q  T
Sbjct: 229 INGRRASLFCGLQKYT 244


>AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.
          Length = 289

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 3   INGSKLSYFCRIQTQT 50
           ING + S FC +Q  T
Sbjct: 224 INGRRASLFCGLQKYT 239


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,314
Number of Sequences: 438
Number of extensions: 2830
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)