Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_B14
         (586 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_41459| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.8  
SB_8792| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   3.7  
SB_17996| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.9  
SB_15228| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.5  
SB_13020| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.5  

>SB_41459| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1675

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 14/64 (21%), Positives = 35/64 (54%)
 Frame = +3

Query: 84  TIETHSIYSVLYFLVEDIRIDGIQEKKKLFNIFCYNLISHSICFLLLYLYVFTMSLYNLV 263
           +I ++S+Y  L+ LV  + +  +    ++  + C++++   + FLL  L V  +  +++V
Sbjct: 127 SITSNSLYEYLFCLVSAVVVASLLSPLRVLVLPCFSVV---VAFLLCPLRVIVLPCFSVV 183

Query: 264 TIFI 275
             F+
Sbjct: 184 VAFL 187


>SB_8792| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1045

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = +3

Query: 189  NLISHSICFLLLYLY--VFTMSLYNLVTIFIKGAG*IWSFKFW 311
            +L+ +++C   LY+Y  + T+S  NLVTI  K  G +  F F+
Sbjct: 975  SLLVYAVCVTPLYVYLSIVTLSELNLVTISWKPRGFLLYFIFY 1017


>SB_17996| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 778

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = -2

Query: 480 KAKF*ILLASPICKQ*FKQNPLPPSPFHHDNI---YEYIDII 364
           +A F I+L S   K       L PSPFHHDN    + YI II
Sbjct: 258 RAYFSIILTSSPSKY---HRHLVPSPFHHDNSLHHFPYISII 296


>SB_15228| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 110

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -3

Query: 521 QNQER*FRTVQVLQKQNFRYFWHHQFVSNSLSKTLCPPPL 402
           Q QER F  +  L K+  RY  HH+F  +   K + P  L
Sbjct: 3   QPQERYFFKLLNLHKKRLRYERHHEFPLSCRDKDVVPKGL 42


>SB_13020| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 722

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +2

Query: 359 CKIMSMYSYILSW-WKGEGGKGFCLNYCLQIGDAKSI*NFAFVAL 490
           C ++S Y +++   W  +  +   LNY + +G    I   AFVAL
Sbjct: 490 CPVVSSYVFVIKRKWSAKWVRAALLNYFVNMGFCPEIRMVAFVAL 534


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,716,816
Number of Sequences: 59808
Number of extensions: 257414
Number of successful extensions: 564
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 561
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1410146228
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)