BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I09A02NGRL0002_B14 (586 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z81484-3|CAB03971.1| 346|Caenorhabditis elegans Hypothetical pr... 30 1.1 Z71259-4|CAA95788.2| 501|Caenorhabditis elegans Hypothetical pr... 30 1.1 Z83319-1|CAB05908.1| 322|Caenorhabditis elegans Hypothetical pr... 30 1.4 U41558-3|AAK39244.1| 556|Caenorhabditis elegans Innexin protein... 28 4.2 AC006617-5|AAF39775.1| 325|Caenorhabditis elegans Serpentine re... 27 7.4 Z77134-2|CAB00873.1| 877|Caenorhabditis elegans Hypothetical pr... 27 9.8 U97008-16|AAB52300.1| 303|Caenorhabditis elegans Serpentine rec... 27 9.8 >Z81484-3|CAB03971.1| 346|Caenorhabditis elegans Hypothetical protein C47A10.6 protein. Length = 346 Score = 30.3 bits (65), Expect = 1.1 Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%) Frame = +3 Query: 171 FNIFCYNLISHSI-CFLLLYLYVFTMSLYNLVTIFI 275 F + CY++ S+ CF+L + Y+F + L + TIF+ Sbjct: 90 FGVDCYDMQPSSLRCFILRFPYMFGLILSSTTTIFL 125 >Z71259-4|CAA95788.2| 501|Caenorhabditis elegans Hypothetical protein F13G3.3 protein. Length = 501 Score = 30.3 bits (65), Expect = 1.1 Identities = 11/38 (28%), Positives = 22/38 (57%) Frame = -1 Query: 358 KNLKVISKKLSTYSWSQNLKDHIHPAPLINIVTRLYND 245 KN+K+I K + SW +++ H+ P+ ++L +D Sbjct: 395 KNIKMIEKDFNRMSWKSSVRRHLRNLPINMTYSKLISD 432 >Z83319-1|CAB05908.1| 322|Caenorhabditis elegans Hypothetical protein T02D1.3 protein. Length = 322 Score = 29.9 bits (64), Expect = 1.4 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 9/77 (11%) Frame = +3 Query: 183 CYNLISHSICFLLLYLYVFTMSL---------YNLVTIFIKGAG*IWSFKFWDHEYVDNF 335 C ++ SI F+ LY +FT +L YN++ F G ++ W + +DNF Sbjct: 149 CSKVVEFSIPFIFLYPCIFTFTLNPALGLCRQYNVLYQF--GHIYVFFINNWFNVKLDNF 206 Query: 336 LLITFKFFVKLCQCTRI 386 L+ F++ LC T + Sbjct: 207 LVPNAIFWLFLCTITNV 223 >U41558-3|AAK39244.1| 556|Caenorhabditis elegans Innexin protein 7 protein. Length = 556 Score = 28.3 bits (60), Expect = 4.2 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 6/57 (10%) Frame = +3 Query: 189 NLISHSI-CFLLLYLY-----VFTMSLYNLVTIFIKGAG*IWSFKFWDHEYVDNFLL 341 N+ H++ C LLL L+ VF + Y L+T F G W F ++ Y ++F+L Sbjct: 291 NVQMHTVQCVLLLNLFTEKIFVFLWAWYILLTAFTVGNLFSWLFAVFNETYNEHFIL 347 >AC006617-5|AAF39775.1| 325|Caenorhabditis elegans Serpentine receptor, class d (delta)protein 65 protein. Length = 325 Score = 27.5 bits (58), Expect = 7.4 Identities = 12/40 (30%), Positives = 20/40 (50%) Frame = -3 Query: 491 QVLQKQNFRYFWHHQFVSNSLSKTLCPPPLSTMIIYTSTL 372 Q + + + WH+ F+ L+ TL PP + +Y TL Sbjct: 124 QEIGRNTLIFSWHYLFIIAYLTSTLIPPS-DHLAVYNETL 162 >Z77134-2|CAB00873.1| 877|Caenorhabditis elegans Hypothetical protein R09H10.4 protein. Length = 877 Score = 27.1 bits (57), Expect = 9.8 Identities = 10/27 (37%), Positives = 18/27 (66%) Frame = +3 Query: 195 ISHSICFLLLYLYVFTMSLYNLVTIFI 275 IS S+C L+ + V + +YN+ T+F+ Sbjct: 683 ISTSVCTLICMMIVCFLFMYNVFTVFV 709 >U97008-16|AAB52300.1| 303|Caenorhabditis elegans Serpentine receptor, class sx protein24 protein. Length = 303 Score = 27.1 bits (57), Expect = 9.8 Identities = 10/29 (34%), Positives = 20/29 (68%) Frame = +3 Query: 189 NLISHSICFLLLYLYVFTMSLYNLVTIFI 275 +++S S CFL+ +F M++ +L+ +FI Sbjct: 72 SVMSSSTCFLISIYGIFAMNMQSLLALFI 100 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,681,049 Number of Sequences: 27780 Number of extensions: 223279 Number of successful extensions: 685 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 665 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 684 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1226509528 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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