Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_B14
         (586 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    25   0.72 
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    24   1.3  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    22   5.1  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    22   5.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   5.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   5.1  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   5.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   8.9  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = -3

Query: 497 TVQVLQKQNFRYF--WHHQFVSNSLSKTLCPPP 405
           T  VLQ++   Y     H+FV+  L + L PPP
Sbjct: 347 TADVLQEEEEEYSPSVQHEFVTFDLDEPLPPPP 379


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/37 (27%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +3

Query: 132 DIRIDGIQEK-KKLFNIFCYNLISHSICFLLLYLYVF 239
           +I+++  + K K+  N+F  N+++ S C L + ++ F
Sbjct: 261 NIQLEHFEMKIKRKHNVFVNNILAASACSLFVVIFHF 297


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 507 ALLILSLHTNLYXIYLHVAKLFFL 578
           A  +LS  TN+Y I +    LF+L
Sbjct: 103 ATCVLSCWTNIYYIIILAWALFYL 126


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 507 ALLILSLHTNLYXIYLHVAKLFFL 578
           A  +LS  TN+Y I +    LF+L
Sbjct: 156 ATCVLSCWTNIYYIIILAWALFYL 179


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +2

Query: 95  SFNILCTLFSC*RYTYRWYSR 157
           S +++C   +C    YRWY++
Sbjct: 254 STSLVCVAQACPTPEYRWYAQ 274


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +2

Query: 95  SFNILCTLFSC*RYTYRWYSR 157
           S +++C   +C    YRWY++
Sbjct: 254 STSLVCVAQACPTPEYRWYAQ 274


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 541 YKFVCKLKIKSADL 500
           Y+ +CK K+K ADL
Sbjct: 426 YQAICKPKLKIADL 439


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -3

Query: 470  FRYFWHHQ 447
            FR FWHH+
Sbjct: 980  FRGFWHHR 987


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,209
Number of Sequences: 438
Number of extensions: 3227
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)