Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_B13
         (656 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    23   2.9  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   2.9  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   6.7  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   6.7  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.9  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.9  

>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +3

Query: 216 KWGMGIKTPQGMNVHHQSVQRHPTLPLHLRKMPLPRKEMTG 338
           K   G K P  + +  Q +  H T+PL   +  L  +EM G
Sbjct: 284 KKASGTKNPLALQLMAQGLYNHSTIPLTKEEEEL--QEMQG 322


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 358 FFIINDGPVISFLGRGIFLRCN 293
           FF I  G ++SF+   +FL C+
Sbjct: 383 FFSITRGLILSFVDYFVFLLCS 404


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 454 DHRGSEPLPTAQCVHCCV 507
           +H GS+P    +C + CV
Sbjct: 252 NHAGSKPFQCNKCDYTCV 269


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 454 DHRGSEPLPTAQCVHCCV 507
           +H GS+P    +C + CV
Sbjct: 10  NHAGSKPFQCNKCDYTCV 27


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +2

Query: 284 YATVTSEKDASPEKGDDWTVINNEKDLLD 370
           Y+  T + +    KG+ W    NE++  D
Sbjct: 552 YSAATQDLNKLLRKGEKWRWGRNEQEAFD 580


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 4   LSGRHSHGGISTSR*CEHFE 63
           LSG H+  G+      EHFE
Sbjct: 283 LSGYHALSGLKAPPGVEHFE 302


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +2

Query: 182 EGGATPAASDAEMGDGDKNTAGNECASSVRSETSYATVTSEKDASPEKGD 331
           EGG   +  + +  +GD++T G+   +S  S         E+ ASP  GD
Sbjct: 15  EGGEEGSPEEGDKLEGDEDT-GSMTPNSAASPAP----PEEEAASPTPGD 59


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,712
Number of Sequences: 336
Number of extensions: 2808
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)