Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_B12
         (569 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC132917-1|AAI32918.1|  579|Homo sapiens zinc finger protein 248...    31   2.9  
BC132915-1|AAI32916.1|  579|Homo sapiens zinc finger protein 248...    31   2.9  
AL135791-5|CAI12322.1|  579|Homo sapiens zinc finger protein 248...    31   2.9  
AJ491695-1|CAD36954.1|  579|Homo sapiens zinc finger protein 248...    31   2.9  

>BC132917-1|AAI32918.1|  579|Homo sapiens zinc finger protein 248
           protein.
          Length = 579

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = -2

Query: 520 PYHNFSNKYDIKYS*TKHYGGCSLDEFGRCSCYH*TSKGFHHDAYCYAN-RNYVHDVCCN 344
           P    S KYD K +   ++   S   FG+   Y    +GFH +A  + N R+ + +  C 
Sbjct: 184 PIGEKSYKYDQKRNAINYHQDLSQPSFGQSFEYSKNGQGFHDEAAFFTNKRSQIGETVCK 243

Query: 343 LDE 335
            +E
Sbjct: 244 YNE 246


>BC132915-1|AAI32916.1|  579|Homo sapiens zinc finger protein 248
           protein.
          Length = 579

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = -2

Query: 520 PYHNFSNKYDIKYS*TKHYGGCSLDEFGRCSCYH*TSKGFHHDAYCYAN-RNYVHDVCCN 344
           P    S KYD K +   ++   S   FG+   Y    +GFH +A  + N R+ + +  C 
Sbjct: 184 PIGEKSYKYDQKRNAINYHQDLSQPSFGQSFEYSKNGQGFHDEAAFFTNKRSQIGETVCK 243

Query: 343 LDE 335
            +E
Sbjct: 244 YNE 246


>AL135791-5|CAI12322.1|  579|Homo sapiens zinc finger protein 248
           protein.
          Length = 579

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = -2

Query: 520 PYHNFSNKYDIKYS*TKHYGGCSLDEFGRCSCYH*TSKGFHHDAYCYAN-RNYVHDVCCN 344
           P    S KYD K +   ++   S   FG+   Y    +GFH +A  + N R+ + +  C 
Sbjct: 184 PIGEKSYKYDQKRNAINYHQDLSQPSFGQSFEYSKNGQGFHDEAAFFTNKRSQIGETVCK 243

Query: 343 LDE 335
            +E
Sbjct: 244 YNE 246


>AJ491695-1|CAD36954.1|  579|Homo sapiens zinc finger protein 248
           protein.
          Length = 579

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = -2

Query: 520 PYHNFSNKYDIKYS*TKHYGGCSLDEFGRCSCYH*TSKGFHHDAYCYAN-RNYVHDVCCN 344
           P    S KYD K +   ++   S   FG+   Y    +GFH +A  + N R+ + +  C 
Sbjct: 184 PIGEKSYKYDQKRNAINYHQDLSQPSFGQSFEYSKNGQGFHDEAAFFTNKRSQIGETVCK 243

Query: 343 LDE 335
            +E
Sbjct: 244 YNE 246


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,115,194
Number of Sequences: 237096
Number of extensions: 1629982
Number of successful extensions: 3161
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3161
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)