BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I09A02NGRL0002_B10 (585 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_17519| Best HMM Match : HLH (HMM E-Value=6e-08) 56 2e-08 SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 9e-04 SB_32910| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005 SB_43185| Best HMM Match : HLH (HMM E-Value=4e-20) 36 0.024 SB_3962| Best HMM Match : HLH (HMM E-Value=8.8e-05) 35 0.043 SB_7678| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.098 SB_39365| Best HMM Match : HLH (HMM E-Value=5.5e-07) 34 0.098 SB_27345| Best HMM Match : HLH (HMM E-Value=1.2e-20) 32 0.40 SB_9126| Best HMM Match : HLH (HMM E-Value=2.5e-18) 31 0.52 SB_12347| Best HMM Match : HLH (HMM E-Value=3.8e-21) 31 0.69 SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2 SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8 SB_7128| Best HMM Match : Usp (HMM E-Value=8.3) 29 2.8 SB_50014| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7 SB_12345| Best HMM Match : HLH (HMM E-Value=1.4e-12) 29 3.7 SB_37864| Best HMM Match : Extensin_2 (HMM E-Value=0.064) 28 6.4 SB_35667| Best HMM Match : DUF1514 (HMM E-Value=1) 28 6.4 SB_23213| Best HMM Match : SH3_1 (HMM E-Value=9.2e-12) 28 6.4 SB_11829| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4 SB_59638| Best HMM Match : HNF-1_N (HMM E-Value=0) 27 8.5 SB_50054| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5 SB_11943| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 27 8.5 SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5 >SB_17519| Best HMM Match : HLH (HMM E-Value=6e-08) Length = 125 Score = 56.0 bits (129), Expect = 2e-08 Identities = 31/77 (40%), Positives = 50/77 (64%) Frame = +1 Query: 43 KAITAVCATGASVPAIASGRVQRHRDGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQH 222 +A+ A + +S+ AS + RD + + Y +L+++VP +P R+ISK+E++Q+ Sbjct: 14 EALRATIRSASSITR-ASIFSEFERDSNDNMSECY-ERLKNMVPNVPVGRRISKVEILQY 71 Query: 223 VIDYICDLQSALENHPA 273 VIDYI DLQ+ALEN A Sbjct: 72 VIDYILDLQTALENQTA 88 >SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 783 Score = 40.7 bits (91), Expect = 9e-04 Identities = 18/43 (41%), Positives = 26/43 (60%) Frame = +1 Query: 142 MYLSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALENHP 270 M S+L+ LVP + ++SK++VI+ I YI LQ AL P Sbjct: 455 MEYSRLRSLVPSVASKSRVSKIQVIEEAIKYIAQLQDALRTQP 497 >SB_32910| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 155 Score = 38.3 bits (85), Expect = 0.005 Identities = 19/64 (29%), Positives = 36/64 (56%) Frame = +1 Query: 82 PAIASGRVQRHRDGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALE 261 P+ + R +R R+ + S L+ +P+ P+ +K+SK+E ++ + YI LQS +E Sbjct: 69 PSAVARRNERERNRVRL-VNDGFSSLRQHIPYFPEKKKLSKVETLRCAVAYIKHLQSLIE 127 Query: 262 NHPA 273 + A Sbjct: 128 EYDA 131 >SB_43185| Best HMM Match : HLH (HMM E-Value=4e-20) Length = 232 Score = 35.9 bits (79), Expect = 0.024 Identities = 22/68 (32%), Positives = 35/68 (51%) Frame = +1 Query: 55 AVCATGASVPAIASGRVQRHRDGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDY 234 AV PA+ + R R R ++ +L+ VP PKN+K+SK++ ++ I+Y Sbjct: 54 AVSTAKQKEPAVVARRNARERKRVKLVNDGFM-RLRKHVPTDPKNKKLSKVKTLRSAIEY 112 Query: 235 ICDLQSAL 258 I LQ L Sbjct: 113 IRHLQHLL 120 >SB_3962| Best HMM Match : HLH (HMM E-Value=8.8e-05) Length = 149 Score = 35.1 bits (77), Expect = 0.043 Identities = 17/44 (38%), Positives = 27/44 (61%) Frame = +1 Query: 106 QRHRDGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDYI 237 QR R AE Y KL+++VP + + +K++KL+ IQ +YI Sbjct: 87 QRDRLRSEAEQNAY-KKLREIVPALKEQKKVTKLDTIQQTCEYI 129 >SB_7678| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1432 Score = 33.9 bits (74), Expect = 0.098 Identities = 15/39 (38%), Positives = 25/39 (64%) Frame = +1 Query: 133 EIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQ 249 ++Q +L+ +VP +P R I K ++QH D+ICDL+ Sbjct: 829 QMQDAFCQLRSMVPDLP--RAIGKARLLQHAADFICDLK 865 >SB_39365| Best HMM Match : HLH (HMM E-Value=5.5e-07) Length = 105 Score = 33.9 bits (74), Expect = 0.098 Identities = 20/49 (40%), Positives = 28/49 (57%) Frame = +1 Query: 103 VQRHRDGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQ 249 + R R E A I+ L+ L L+P NRK+SK ++Q I+YI LQ Sbjct: 41 ISRQRKREYA-IREALNHLNSLLPLDNPNRKLSKNMILQTAIEYIRSLQ 88 >SB_27345| Best HMM Match : HLH (HMM E-Value=1.2e-20) Length = 153 Score = 31.9 bits (69), Expect = 0.40 Identities = 14/36 (38%), Positives = 23/36 (63%) Frame = +1 Query: 157 LQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALEN 264 L+ +P P N+K+SK+E ++ I+YI LQ L + Sbjct: 94 LRKHIPTTPVNKKLSKVETLRTAIEYIKHLQRILND 129 >SB_9126| Best HMM Match : HLH (HMM E-Value=2.5e-18) Length = 179 Score = 31.5 bits (68), Expect = 0.52 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Frame = +1 Query: 91 ASGRVQRHRDGENAEIQMYLSKLQDLVPFMPKN-RKISKLEVIQHVIDYICDLQSALEN 264 AS R ++ R N +++ K VP + +N +K+SK+EV++ IDYI L L N Sbjct: 43 ASARERKRRHVLNNALELLRKK----VPCVDQNPQKLSKIEVLRLAIDYIAMLSCYLNN 97 >SB_12347| Best HMM Match : HLH (HMM E-Value=3.8e-21) Length = 143 Score = 31.1 bits (67), Expect = 0.69 Identities = 19/64 (29%), Positives = 32/64 (50%) Frame = +1 Query: 67 TGASVPAIASGRVQRHRDGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDYICDL 246 TG S A+ +R+R + + L+ L+P P +RK+SK+E ++ YI L Sbjct: 46 TGLSKQRQAANARERNR---THSVNAAFNALRLLIPTEPSDRKLSKIETLRLASSYIAHL 102 Query: 247 QSAL 258 + L Sbjct: 103 STIL 106 >SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 5834 Score = 30.3 bits (65), Expect = 1.2 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%) Frame = -2 Query: 173 GTKSCNLDRYICISAFSPSRCL-CTRPLAMAGTEAP 69 GT CN D +C +F P RC+ CT A E P Sbjct: 247 GTPDCN-DNGVCDGSFDPPRCINCTNNTMGAACELP 281 >SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 459 Score = 29.1 bits (62), Expect = 2.8 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 5/78 (6%) Frame = +3 Query: 168 GPLYAEEQEDLKIRGDTTCDRLHLRPSISVGESPCRWTVRRGGCLGIVS-----LCRVTS 332 G L A +D+ + + + S S + W V RGGCL ++S + ++ Sbjct: 282 GTLLASCSDDMSAKLPLGANNILCASSASYDTTVRLWDVERGGCLQVLSKHHEPVYTISF 341 Query: 333 TPPSKAAAGTSFCAKYHL 386 +P + A SF + H+ Sbjct: 342 SPDGRYLASGSFDKRVHI 359 >SB_7128| Best HMM Match : Usp (HMM E-Value=8.3) Length = 278 Score = 29.1 bits (62), Expect = 2.8 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +2 Query: 374 QIPSCRLHP*TRIIETKRHQRNKTNQTGRHR 466 QI R H +I+ T+RH++ +T TGRH+ Sbjct: 51 QILLTRRHKNAQILVTRRHKKAQTLLTGRHK 81 Score = 28.7 bits (61), Expect = 3.7 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +2 Query: 374 QIPSCRLHP*TRIIETKRHQRNKTNQTGRHR 466 QI R H +I+ T+RH++ +T TGRH+ Sbjct: 106 QILLTRRHKKAQILLTRRHKKAQTLLTGRHK 136 >SB_50014| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 615 Score = 28.7 bits (61), Expect = 3.7 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +2 Query: 374 QIPSCRLHP*TRIIETKRHQRNKTNQTGRHR 466 QI R H +I+ T+RH++ +T TGRH+ Sbjct: 570 QILLTRRHKKAQILLTRRHKKAQTLLTGRHK 600 >SB_12345| Best HMM Match : HLH (HMM E-Value=1.4e-12) Length = 124 Score = 28.7 bits (61), Expect = 3.7 Identities = 12/38 (31%), Positives = 21/38 (55%) Frame = +1 Query: 157 LQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALENHP 270 L++L+P P+ ++ +K E+I YI L +E P Sbjct: 70 LRELIPLPPQEKEPTKTEIIWMAAKYIALLSDMVEQEP 107 >SB_37864| Best HMM Match : Extensin_2 (HMM E-Value=0.064) Length = 1230 Score = 27.9 bits (59), Expect = 6.4 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 6/73 (8%) Frame = -3 Query: 445 GFVSLVSFGFYDPGSRVKSARWYLAQNEVPAAAFE---GGVEVTRHKETMPRHPPRRTVQ 275 GF + FG+YD SR + A+ Y +Q P A + G K+ + PP + Q Sbjct: 656 GFKASPGFGWYDEYSRPQPAQQYSSQGLPPQAPQQYSWQGPPPQAAKQYYSQEPPPQAAQ 715 Query: 274 R---QGDSPTLIE 245 + QG P E Sbjct: 716 QYSSQGPPPQAAE 728 >SB_35667| Best HMM Match : DUF1514 (HMM E-Value=1) Length = 241 Score = 27.9 bits (59), Expect = 6.4 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = -2 Query: 191 LFFGIKGTKSCNLDRYICISAFSPSRCLCT 102 LFFG T S +Y C++A RC CT Sbjct: 58 LFFGYNMTYSIMACKYSCLNARKIERCGCT 87 >SB_23213| Best HMM Match : SH3_1 (HMM E-Value=9.2e-12) Length = 979 Score = 27.9 bits (59), Expect = 6.4 Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 3/73 (4%) Frame = +1 Query: 37 TMKAITAVCATGASVPAIASGRVQRHRDGENAEIQMYLSKLQDLVPFMPKNRKISKLE-- 210 T + +T CA VPA+A G + H N + Y ++ +++ N+ IS E Sbjct: 579 TYRLLTEACAENHQVPAVAKGDDEEHEKRPNRLHESYGNRRKNI-----SNKLISHQEAF 633 Query: 211 -VIQHVIDYICDL 246 +Q+V+ ++ D+ Sbjct: 634 HAMQNVLRHLNDV 646 >SB_11829| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 495 Score = 27.9 bits (59), Expect = 6.4 Identities = 12/51 (23%), Positives = 27/51 (52%) Frame = +1 Query: 112 HRDGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALEN 264 H A++ L+ L+P + K+ K++++++ I+YI L + L + Sbjct: 443 HERRRVAQLNGAYQDLRQLIPGYQCDTKLPKIKILRYAINYIAHLDNILSD 493 >SB_59638| Best HMM Match : HNF-1_N (HMM E-Value=0) Length = 808 Score = 27.5 bits (58), Expect = 8.5 Identities = 12/31 (38%), Positives = 15/31 (48%) Frame = +1 Query: 367 SAPNTILPTSPLNQDHRNQTTPEKQNQPDRP 459 S+ N ILP SP D TPE + + P Sbjct: 60 SSENVILPASPCEPDSPKPYTPESEGREGSP 90 >SB_50054| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 937 Score = 27.5 bits (58), Expect = 8.5 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Frame = -3 Query: 346 FEGGVEVTRHKETMP-RHPPRRTVQRQGDSPTLIEGRR 236 + G + RHK TM +H P T ++ SPT +E R Sbjct: 87 YGGTLAEVRHKPTMSDKHIPLHTTLKKKHSPTKLENTR 124 >SB_11943| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) Length = 591 Score = 27.5 bits (58), Expect = 8.5 Identities = 17/52 (32%), Positives = 25/52 (48%) Frame = +1 Query: 34 LTMKAITAVCATGASVPAIASGRVQRHRDGENAEIQMYLSKLQDLVPFMPKN 189 L+ + T A S PA SG+ + D I++ +S +Q LV F P N Sbjct: 385 LSPEKTTEGSANQYSYPAPMSGKPECLADDSKQHIRITMSDVQPLVAFWPGN 436 >SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 686 Score = 27.5 bits (58), Expect = 8.5 Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 1/32 (3%) Frame = -1 Query: 537 CPAF-RGILLILTVMSLSYFMSNLTRCRPVWL 445 C F G LI T MSLS + +N PVWL Sbjct: 602 CSLFIMGSSLIATCMSLSLYYNNAMAPMPVWL 633 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,306,797 Number of Sequences: 59808 Number of extensions: 427597 Number of successful extensions: 1331 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 1093 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1331 length of database: 16,821,457 effective HSP length: 78 effective length of database: 12,156,433 effective search space used: 1410146228 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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