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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_B10
         (585 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_17519| Best HMM Match : HLH (HMM E-Value=6e-08)                     56   2e-08
SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.)              41   9e-04
SB_32910| Best HMM Match : No HMM Matches (HMM E-Value=.)              38   0.005
SB_43185| Best HMM Match : HLH (HMM E-Value=4e-20)                     36   0.024
SB_3962| Best HMM Match : HLH (HMM E-Value=8.8e-05)                    35   0.043
SB_7678| Best HMM Match : No HMM Matches (HMM E-Value=.)               34   0.098
SB_39365| Best HMM Match : HLH (HMM E-Value=5.5e-07)                   34   0.098
SB_27345| Best HMM Match : HLH (HMM E-Value=1.2e-20)                   32   0.40 
SB_9126| Best HMM Match : HLH (HMM E-Value=2.5e-18)                    31   0.52 
SB_12347| Best HMM Match : HLH (HMM E-Value=3.8e-21)                   31   0.69 
SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.2  
SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.8  
SB_7128| Best HMM Match : Usp (HMM E-Value=8.3)                        29   2.8  
SB_50014| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.7  
SB_12345| Best HMM Match : HLH (HMM E-Value=1.4e-12)                   29   3.7  
SB_37864| Best HMM Match : Extensin_2 (HMM E-Value=0.064)              28   6.4  
SB_35667| Best HMM Match : DUF1514 (HMM E-Value=1)                     28   6.4  
SB_23213| Best HMM Match : SH3_1 (HMM E-Value=9.2e-12)                 28   6.4  
SB_11829| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.4  
SB_59638| Best HMM Match : HNF-1_N (HMM E-Value=0)                     27   8.5  
SB_50054| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.5  
SB_11943| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)                 27   8.5  
SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.5  

>SB_17519| Best HMM Match : HLH (HMM E-Value=6e-08)
          Length = 125

 Score = 56.0 bits (129), Expect = 2e-08
 Identities = 31/77 (40%), Positives = 50/77 (64%)
 Frame = +1

Query: 43  KAITAVCATGASVPAIASGRVQRHRDGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQH 222
           +A+ A   + +S+   AS   +  RD  +   + Y  +L+++VP +P  R+ISK+E++Q+
Sbjct: 14  EALRATIRSASSITR-ASIFSEFERDSNDNMSECY-ERLKNMVPNVPVGRRISKVEILQY 71

Query: 223 VIDYICDLQSALENHPA 273
           VIDYI DLQ+ALEN  A
Sbjct: 72  VIDYILDLQTALENQTA 88


>SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 783

 Score = 40.7 bits (91), Expect = 9e-04
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = +1

Query: 142 MYLSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALENHP 270
           M  S+L+ LVP +    ++SK++VI+  I YI  LQ AL   P
Sbjct: 455 MEYSRLRSLVPSVASKSRVSKIQVIEEAIKYIAQLQDALRTQP 497


>SB_32910| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 155

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 19/64 (29%), Positives = 36/64 (56%)
 Frame = +1

Query: 82  PAIASGRVQRHRDGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALE 261
           P+  + R +R R+     +    S L+  +P+ P+ +K+SK+E ++  + YI  LQS +E
Sbjct: 69  PSAVARRNERERNRVRL-VNDGFSSLRQHIPYFPEKKKLSKVETLRCAVAYIKHLQSLIE 127

Query: 262 NHPA 273
            + A
Sbjct: 128 EYDA 131


>SB_43185| Best HMM Match : HLH (HMM E-Value=4e-20)
          Length = 232

 Score = 35.9 bits (79), Expect = 0.024
 Identities = 22/68 (32%), Positives = 35/68 (51%)
 Frame = +1

Query: 55  AVCATGASVPAIASGRVQRHRDGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDY 234
           AV       PA+ + R  R R         ++ +L+  VP  PKN+K+SK++ ++  I+Y
Sbjct: 54  AVSTAKQKEPAVVARRNARERKRVKLVNDGFM-RLRKHVPTDPKNKKLSKVKTLRSAIEY 112

Query: 235 ICDLQSAL 258
           I  LQ  L
Sbjct: 113 IRHLQHLL 120


>SB_3962| Best HMM Match : HLH (HMM E-Value=8.8e-05)
          Length = 149

 Score = 35.1 bits (77), Expect = 0.043
 Identities = 17/44 (38%), Positives = 27/44 (61%)
 Frame = +1

Query: 106 QRHRDGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDYI 237
           QR R    AE   Y  KL+++VP + + +K++KL+ IQ   +YI
Sbjct: 87  QRDRLRSEAEQNAY-KKLREIVPALKEQKKVTKLDTIQQTCEYI 129


>SB_7678| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1432

 Score = 33.9 bits (74), Expect = 0.098
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = +1

Query: 133 EIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQ 249
           ++Q    +L+ +VP +P  R I K  ++QH  D+ICDL+
Sbjct: 829 QMQDAFCQLRSMVPDLP--RAIGKARLLQHAADFICDLK 865


>SB_39365| Best HMM Match : HLH (HMM E-Value=5.5e-07)
          Length = 105

 Score = 33.9 bits (74), Expect = 0.098
 Identities = 20/49 (40%), Positives = 28/49 (57%)
 Frame = +1

Query: 103 VQRHRDGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQ 249
           + R R  E A I+  L+ L  L+P    NRK+SK  ++Q  I+YI  LQ
Sbjct: 41  ISRQRKREYA-IREALNHLNSLLPLDNPNRKLSKNMILQTAIEYIRSLQ 88


>SB_27345| Best HMM Match : HLH (HMM E-Value=1.2e-20)
          Length = 153

 Score = 31.9 bits (69), Expect = 0.40
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +1

Query: 157 LQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALEN 264
           L+  +P  P N+K+SK+E ++  I+YI  LQ  L +
Sbjct: 94  LRKHIPTTPVNKKLSKVETLRTAIEYIKHLQRILND 129


>SB_9126| Best HMM Match : HLH (HMM E-Value=2.5e-18)
          Length = 179

 Score = 31.5 bits (68), Expect = 0.52
 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
 Frame = +1

Query: 91  ASGRVQRHRDGENAEIQMYLSKLQDLVPFMPKN-RKISKLEVIQHVIDYICDLQSALEN 264
           AS R ++ R   N  +++   K    VP + +N +K+SK+EV++  IDYI  L   L N
Sbjct: 43  ASARERKRRHVLNNALELLRKK----VPCVDQNPQKLSKIEVLRLAIDYIAMLSCYLNN 97


>SB_12347| Best HMM Match : HLH (HMM E-Value=3.8e-21)
          Length = 143

 Score = 31.1 bits (67), Expect = 0.69
 Identities = 19/64 (29%), Positives = 32/64 (50%)
 Frame = +1

Query: 67  TGASVPAIASGRVQRHRDGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDYICDL 246
           TG S    A+   +R+R      +    + L+ L+P  P +RK+SK+E ++    YI  L
Sbjct: 46  TGLSKQRQAANARERNR---THSVNAAFNALRLLIPTEPSDRKLSKIETLRLASSYIAHL 102

Query: 247 QSAL 258
            + L
Sbjct: 103 STIL 106


>SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 5834

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = -2

Query: 173 GTKSCNLDRYICISAFSPSRCL-CTRPLAMAGTEAP 69
           GT  CN D  +C  +F P RC+ CT     A  E P
Sbjct: 247 GTPDCN-DNGVCDGSFDPPRCINCTNNTMGAACELP 281


>SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 459

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
 Frame = +3

Query: 168 GPLYAEEQEDLKIRGDTTCDRLHLRPSISVGESPCRWTVRRGGCLGIVS-----LCRVTS 332
           G L A   +D+  +     + +    S S   +   W V RGGCL ++S     +  ++ 
Sbjct: 282 GTLLASCSDDMSAKLPLGANNILCASSASYDTTVRLWDVERGGCLQVLSKHHEPVYTISF 341

Query: 333 TPPSKAAAGTSFCAKYHL 386
           +P  +  A  SF  + H+
Sbjct: 342 SPDGRYLASGSFDKRVHI 359


>SB_7128| Best HMM Match : Usp (HMM E-Value=8.3)
          Length = 278

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +2

Query: 374 QIPSCRLHP*TRIIETKRHQRNKTNQTGRHR 466
           QI   R H   +I+ T+RH++ +T  TGRH+
Sbjct: 51  QILLTRRHKNAQILVTRRHKKAQTLLTGRHK 81



 Score = 28.7 bits (61), Expect = 3.7
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +2

Query: 374 QIPSCRLHP*TRIIETKRHQRNKTNQTGRHR 466
           QI   R H   +I+ T+RH++ +T  TGRH+
Sbjct: 106 QILLTRRHKKAQILLTRRHKKAQTLLTGRHK 136


>SB_50014| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 615

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +2

Query: 374 QIPSCRLHP*TRIIETKRHQRNKTNQTGRHR 466
           QI   R H   +I+ T+RH++ +T  TGRH+
Sbjct: 570 QILLTRRHKKAQILLTRRHKKAQTLLTGRHK 600


>SB_12345| Best HMM Match : HLH (HMM E-Value=1.4e-12)
          Length = 124

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +1

Query: 157 LQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALENHP 270
           L++L+P  P+ ++ +K E+I     YI  L   +E  P
Sbjct: 70  LRELIPLPPQEKEPTKTEIIWMAAKYIALLSDMVEQEP 107


>SB_37864| Best HMM Match : Extensin_2 (HMM E-Value=0.064)
          Length = 1230

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
 Frame = -3

Query: 445 GFVSLVSFGFYDPGSRVKSARWYLAQNEVPAAAFE---GGVEVTRHKETMPRHPPRRTVQ 275
           GF +   FG+YD  SR + A+ Y +Q   P A  +    G      K+   + PP +  Q
Sbjct: 656 GFKASPGFGWYDEYSRPQPAQQYSSQGLPPQAPQQYSWQGPPPQAAKQYYSQEPPPQAAQ 715

Query: 274 R---QGDSPTLIE 245
           +   QG  P   E
Sbjct: 716 QYSSQGPPPQAAE 728


>SB_35667| Best HMM Match : DUF1514 (HMM E-Value=1)
          Length = 241

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 191 LFFGIKGTKSCNLDRYICISAFSPSRCLCT 102
           LFFG   T S    +Y C++A    RC CT
Sbjct: 58  LFFGYNMTYSIMACKYSCLNARKIERCGCT 87


>SB_23213| Best HMM Match : SH3_1 (HMM E-Value=9.2e-12)
          Length = 979

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
 Frame = +1

Query: 37  TMKAITAVCATGASVPAIASGRVQRHRDGENAEIQMYLSKLQDLVPFMPKNRKISKLE-- 210
           T + +T  CA    VPA+A G  + H    N   + Y ++ +++      N+ IS  E  
Sbjct: 579 TYRLLTEACAENHQVPAVAKGDDEEHEKRPNRLHESYGNRRKNI-----SNKLISHQEAF 633

Query: 211 -VIQHVIDYICDL 246
             +Q+V+ ++ D+
Sbjct: 634 HAMQNVLRHLNDV 646


>SB_11829| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 495

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 12/51 (23%), Positives = 27/51 (52%)
 Frame = +1

Query: 112 HRDGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALEN 264
           H     A++      L+ L+P    + K+ K++++++ I+YI  L + L +
Sbjct: 443 HERRRVAQLNGAYQDLRQLIPGYQCDTKLPKIKILRYAINYIAHLDNILSD 493


>SB_59638| Best HMM Match : HNF-1_N (HMM E-Value=0)
          Length = 808

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +1

Query: 367 SAPNTILPTSPLNQDHRNQTTPEKQNQPDRP 459
           S+ N ILP SP   D     TPE + +   P
Sbjct: 60  SSENVILPASPCEPDSPKPYTPESEGREGSP 90


>SB_50054| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 937

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -3

Query: 346 FEGGVEVTRHKETMP-RHPPRRTVQRQGDSPTLIEGRR 236
           + G +   RHK TM  +H P  T  ++  SPT +E  R
Sbjct: 87  YGGTLAEVRHKPTMSDKHIPLHTTLKKKHSPTKLENTR 124


>SB_11943| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
          Length = 591

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = +1

Query: 34  LTMKAITAVCATGASVPAIASGRVQRHRDGENAEIQMYLSKLQDLVPFMPKN 189
           L+ +  T   A   S PA  SG+ +   D     I++ +S +Q LV F P N
Sbjct: 385 LSPEKTTEGSANQYSYPAPMSGKPECLADDSKQHIRITMSDVQPLVAFWPGN 436


>SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 686

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -1

Query: 537 CPAF-RGILLILTVMSLSYFMSNLTRCRPVWL 445
           C  F  G  LI T MSLS + +N     PVWL
Sbjct: 602 CSLFIMGSSLIATCMSLSLYYNNAMAPMPVWL 633


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,306,797
Number of Sequences: 59808
Number of extensions: 427597
Number of successful extensions: 1331
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1331
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1410146228
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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