Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_B10
(585 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 24 1.3
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 23 2.9
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 2.9
EF493864-1|ABP65286.1| 247|Apis mellifera triosephoshpate isome... 22 5.1
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 5.1
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 22 5.1
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 21 6.7
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 21 6.7
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 21 8.9
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 8.9
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.8 bits (49), Expect = 1.3
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2
Query: 68 PAPPSRPSQVVACK 109
P PP+ P QVV+C+
Sbjct: 1109 PLPPALPPQVVSCQ 1122
Score = 21.8 bits (44), Expect = 5.1
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -3
Query: 232 SLSHVVSPLILRSSCSSA*RGPSLVI*IGTFVSLRFHRHDAFARD 98
S V+SP L SSC S G S ++ + T V+ + ++ + + D
Sbjct: 907 SSKKVLSPGELLSSCVSNDGGCSSLVDVSTPVNKKVYKQNDYIVD 951
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 22.6 bits (46), Expect = 2.9
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 385 LPTSPLNQDHRNQTTPEKQNQPDRP 459
LPT+P +H +TP+ ++ RP
Sbjct: 80 LPTTPEYNNHLYGSTPDSRDYFSRP 104
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.6 bits (46), Expect = 2.9
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = +1
Query: 31 TLTMKAITAVCATGASVPAIASGRVQRHRDGENAEIQMYLSKLQD 165
T T A A AT + I +QRH +N + + +QD
Sbjct: 114 TTTTTATAAATATTTATGLIKQETLQRHHHLQNHHHHLQSTAVQD 158
>EF493864-1|ABP65286.1| 247|Apis mellifera triosephoshpate
isomerase protein.
Length = 247
Score = 21.8 bits (44), Expect = 5.1
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +1
Query: 121 GENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVID-YICDLQSALENHPAV-GQFDAE 294
G N ++ S++ D+V F+ K S +EV+ V Y+ ++ L N+ ++ GQ +
Sbjct: 8 GGNWKMNGTKSEINDIVGFLKKGPLDSNVEVVVGVPSIYLTYAKNILPNNISIAGQNTYK 67
Query: 295 GALASF 312
A +F
Sbjct: 68 VAKGAF 73
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.8 bits (44), Expect = 5.1
Identities = 7/26 (26%), Positives = 13/26 (50%)
Frame = +1
Query: 391 TSPLNQDHRNQTTPEKQNQPDRPTSC 468
+ P++++ R T QP T+C
Sbjct: 1065 SGPMSEERRQHTAEGVPEQPPHDTTC 1090
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.8 bits (44), Expect = 5.1
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 543 NVCPAFRGILLILTVMSLSYFMSNLTRCR 457
NV P F+ + + + +S SY +N T C+
Sbjct: 644 NVYPEFQENVQLCSEISESYSSNNKTLCK 672
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 21.4 bits (43), Expect = 6.7
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +3
Query: 282 VRRGGCLGIVSLCRVTSTPPSKAAAGT 362
+ + G L + SLC + P+K A T
Sbjct: 4 IMKAGFLFLASLCLLVQAVPNKVADKT 30
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 21.4 bits (43), Expect = 6.7
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +3
Query: 282 VRRGGCLGIVSLCRVTSTPPSKAAAGT 362
+ + G L + SLC + P+K A T
Sbjct: 4 IMKAGFLFLASLCLLVQAVPNKVADKT 30
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 21.0 bits (42), Expect = 8.9
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +1
Query: 46 AITAVCATGASVPAIASGRVQRHRDGENAEIQMYLSK 156
A+T G +I V + + G N EI MY+ +
Sbjct: 201 ALTCEGCKGFFRRSITKNAVYQCKYGNNCEIDMYMRR 237
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.0 bits (42), Expect = 8.9
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 65 RPAPPSRPSQVVACKGIVTVK 127
RP+ S SQ++ C G+V V+
Sbjct: 759 RPSFISPRSQLIICSGLVFVQ 779
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,938
Number of Sequences: 438
Number of extensions: 3499
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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